LOCUS BC005149 2078 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens mucolipin 1, mRNA (cDNA clone MGC:3287 IMAGE:3507836), complete cds. ACCESSION BC005149 VERSION BC005149.2 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2078) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2078) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (26-MAR-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Aug 19, 2003 this sequence version replaced BC005149.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Institute for Systems Biology http://www.systemsbiology.org contact: amadan@systemsbiology.org Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 7 Row: c Column: 22 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 10092596. FEATURES Location/Qualifiers source 1..2078 /db_xref="H-InvDB:HIT000032248" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:3287 IMAGE:3507836" /tissue_type="Brain, neuroblastoma" /clone_lib="NIH_MGC_19" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..2078 /gene="MCOLN1" /gene_synonym="ML4" /gene_synonym="MLIV" /gene_synonym="MST080" /gene_synonym="MSTP080" /gene_synonym="TRP-ML1" /gene_synonym="TRPML1" /db_xref="GeneID:57192" /db_xref="HGNC:HGNC:13356" /db_xref="MIM:605248" CDS 124..1866 /gene="MCOLN1" /gene_synonym="ML4" /gene_synonym="MLIV" /gene_synonym="MST080" /gene_synonym="MSTP080" /gene_synonym="TRP-ML1" /gene_synonym="TRPML1" /codon_start=1 /product="mucolipin 1" /protein_id="AAH05149.1" /db_xref="GeneID:57192" /db_xref="HGNC:HGNC:13356" /db_xref="MIM:605248" /translation="MTAPAGPRGSETERLLTPNPGYGTQAGPSPAPPTPPEEEDLRRR LKYFFMSPCDKFRAKGRKPCKLMLQVVKILVVTVQLILFGLSNQLAVTFREENTIAFR HLFLLGYSDGADDTFAAYTREQLYQAIFHAVDQYLALPDVSLGRYAYVRGGGDPWTNG SGLALCQRYYHRGHVDPANDTFDIDPMVVTDCIQVDPPERPPPPPSDDLTLLESSSSY KNLTLKFHKLVNVTIHFRLKTINLQSLINNEIPDCYTFSVLITFDNKAHSGRIPISLE TQAHIQECKHPSVFQHGDNSFRLLFDVVVILTCSLSFLLCARSLLRGFLLQNEFVGFM WRQRGRVISLWERLEFVNGWYILLVTSDVLTISGTIMKIGIEAKNLASYDVCSILLGT STLLVWVGVIRYLTFFHNYNILIATLRVALPSVMRFCCCVAVIYLGYCFCGWIVLGPY HVKFRSLSMVSECLFSLINGDDMFVTFAAMQAQQGRSSLVWLFSQLYLYSFISLFIYM VLSLFIALITGAYDTIKHPGGAGAEESELQAYIAQCQDSPTSGKFRRGSGSACSLLCC CGRDPSEEHSLLVN" BASE COUNT 389 a 675 c 587 g 427 t ORIGIN 1 atcagctgat gccggagggt ttgaagccgc gccgcgaggg agcgaggtcg cagtgacagc 61 ggcgggcgat cggacccagg ctgccccgcc gtacccgcct gcgtcccgcg ctcccgcccc 121 agcatgacag ccccggcggg tccgcgcggc tcagagaccg agcggcttct gacccccaac 181 cccgggtatg ggacccaggc ggggccttca ccggcccctc cgacaccccc agaagaggaa 241 gaccttcgcc gtcgtctcaa atactttttc atgagtccct gcgacaagtt tcgagccaag 301 ggccgcaagc cctgcaagct gatgctgcaa gtggtcaaga tcctggtggt cacggtgcag 361 ctcatcctgt ttgggctcag taatcagctg gctgtgacat tccgggaaga gaacaccatc 421 gccttccgac acctcttcct gctgggctac tcggacggag cggatgacac cttcgcagcc 481 tacacgcggg agcagctgta ccaggccatc ttccatgctg tggaccagta cctggcgttg 541 cctgacgtgt cactgggccg gtatgcgtat gtccgtggtg ggggtgaccc ttggaccaat 601 ggctcagggc ttgctctctg ccagcggtac taccaccgag gccacgtgga cccggccaac 661 gacacatttg acattgatcc gatggtggtt actgactgca tccaggtgga tccccccgag 721 cggccccctc cgccccccag cgacgatctc accctcttgg aaagcagctc cagttacaag 781 aacctcacgc tcaaattcca caagctggtc aatgtcacca tccacttccg gctgaagacc 841 attaacctcc agagcctcat caataatgag atcccggact gctatacctt cagcgtcctg 901 atcacgtttg acaacaaagc acacagtggg cggatcccca tcagcctgga gacccaggcc 961 cacatccagg agtgtaagca ccccagtgtc ttccagcacg gagacaacag cttccggctc 1021 ctgtttgacg tggtggtcat cctcacctgc tccctgtcct tcctcctctg cgcccgctca 1081 ctccttcgag gcttcctgct gcagaacgag tttgtggggt tcatgtggcg gcagcgggga 1141 cgggtcatca gcctgtggga gcggctggaa tttgtcaatg gctggtacat cctgctcgtc 1201 accagcgatg tgctcaccat ctcgggcacc atcatgaaga tcggcatcga ggccaagaac 1261 ttggcgagct acgacgtctg cagcatcctc ctgggcacct cgacgctgct ggtgtgggtg 1321 ggcgtgatcc gctacctgac cttcttccac aactacaata tcctcatcgc cacactgcgg 1381 gtggccctgc ccagcgtcat gcgcttctgc tgctgcgtgg ctgtcatcta cctgggctac 1441 tgcttctgtg gctggatcgt gctggggccc tatcatgtga agttccgctc actctccatg 1501 gtgtctgagt gcctgttctc gctcatcaat ggggacgaca tgtttgtgac gttcgccgcc 1561 atgcaggcgc agcagggccg cagcagcctg gtgtggctct tctcccagct ctacctttac 1621 tccttcatca gcctcttcat ctacatggtg ctcagcctct tcatcgcgct catcaccggc 1681 gcctacgaca ccatcaagca tcccggcggc gcaggcgcag aggagagcga gctgcaggcc 1741 tacatcgcac agtgccagga cagccccacc tccggcaagt tccgccgcgg gagcggctcg 1801 gcctgcagcc ttctctgctg ctgcggaagg gacccctcgg aggagcattc gctgctggtg 1861 aattgattcg acctgactgc cgttggaccg taggccctgg actgcagaga cccccgcccc 1921 cgaccccgct tatttatttg tagggtttgc ttttaaggat cggctccctg tcgcgcccga 1981 ggagggcctg gacctttcgt gtcggaccct tgggggcggg gagactgggt ggggagggtg 2041 ttgaataaaa gggaaaataa aaaaaaaaaa aaaaaaaa //