LOCUS BC005141 1825 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens galactokinase 2, mRNA (cDNA clone MGC:1745
IMAGE:3504930), complete cds.
ACCESSION BC005141
VERSION BC005141.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1825)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1825)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (26-MAR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 20, 2003 this sequence version replaced BC005141.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 7 Row: a Column: 21
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 48527955.
FEATURES Location/Qualifiers
source 1..1825
/db_xref="H-InvDB:HIT000032243"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:1745 IMAGE:3504930"
/tissue_type="Placenta, choriocarcinoma"
/clone_lib="NIH_MGC_21"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1825
/gene="GALK2"
/gene_synonym="GK2"
/gene_synonym="MGC1745"
/db_xref="GeneID:2585"
/db_xref="HGNC:HGNC:4119"
/db_xref="MIM:137028"
CDS 76..1452
/gene="GALK2"
/gene_synonym="GK2"
/gene_synonym="MGC1745"
/codon_start=1
/product="galactokinase 2"
/protein_id="AAH05141.1"
/db_xref="GeneID:2585"
/db_xref="HGNC:HGNC:4119"
/db_xref="MIM:137028"
/translation="MATESPATRRVQVAEHPRLLKLKEMFNSKFGSIPKFYVRAPGRV
NIIGEHIDYCGYSVLPMAVEQDVLIAVEPVKTYALQLANTNPLYPDFSTSANNIQIDK
TKPLWHNYFLCGLKGIQEHFGLSNLTGMNCLVDGNIPPSSGLSSSSALVCCAGLVTLT
VLGRNLSKVELAEICAKSERYIGTEGGGMDQSISFLAEEGTAKLIEFSPLRATDVKLP
SGAVFVIANSCVEMNKAATSHFNIRVMECRLAAKLLAKYKSLQWDKVLRLEEVQAKLG
ISLEEMLLVTEDALHPEPYNPEEICRCLGISLEELRTQILSPNTQDVLIFKLYQRAKH
VYSEAARVLQFKKICEEAPENMVQLLGELMNQSHMSCRDMYECSCPELDQLVDICRKF
GAQGSRLTGAGWGGCTVSMVPADKLPSFLANVHKAYYQRSDGSLAPEKQSLFATKPGG
GALVLLEA"
BASE COUNT 543 a 346 c 452 g 484 t
ORIGIN
1 cagaagtctc gtgattgctc tgggagcttt gcttagacac ttgaaactac aggagaaaga
61 aggatctagc gaaatatggc tacagagagc cctgctacgc gtcgggtcca ggtggcagaa
121 catcctaggt tactgaagct aaaggagatg tttaactcca agtttggatc tattcccaag
181 ttttatgttc gagcaccagg aagagtcaac ataataggag agcatataga ttattgtgga
241 tattctgttc ttcctatggc tgtagaacaa gatgtgctaa tagctgtaga acctgtgaaa
301 acgtacgctc tccaactggc caatacaaat cccttgtatc cggacttcag tactagtgct
361 aataacatcc agattgataa aaccaagcct ttgtggcaca actatttctt atgtggactt
421 aaaggaattc aggaacactt tggtcttagt aacctgactg gaatgaactg cctggtagat
481 ggaaatatcc caccaagttc tggcctctcc agctccagtg ctttggtctg ttgtgctggc
541 ttggtgacgc tcacagtgct gggaaggaat ctatccaagg tggaacttgc agaaatctgt
601 gccaagagtg agcgttacat tggcactgaa ggaggaggca tggaccagtc tatatcattt
661 cttgcagaag aaggaactgc caagttgata gaatttagtc ctctgagggc aaccgatgta
721 aaactcccaa gtggagcagt gtttgtgatt gccaacagtt gtgtggagat gaataaggca
781 gcaacttccc atttcaatat cagggtgatg gagtgtcggc tggctgcgaa gctcctggct
841 aaatacaaaa gcttgcaatg ggacaaagta ctgaggctgg aggaggtgca ggctaaacta
901 gggattagtc tagaagaaat gctgttggtc acagaagatg cccttcatcc tgaaccctat
961 aaccctgagg agatctgcag gtgtctggga attagcctgg aggaactccg aacccaaatc
1021 ctgagtccaa acactcaaga tgtgctcatc ttcaaactct atcagcgggc aaagcatgtg
1081 tacagcgagg ctgcgcgagt gctccagttt aagaagatat gtgaagaagc acctgaaaac
1141 atggtccagc tgctgggaga gttgatgaac cagagccaca tgagctgccg ggacatgtat
1201 gagtgcagct gccccgagct ggatcagctg gtggacatct gtcggaagtt tggggctcaa
1261 gggtcacgac ttactggagc aggatgggga ggctgtacag tatcaatggt acctgcggac
1321 aagctgccca gctttctagc aaatgtgcac aaagcttatt accagaggag tgatggaagc
1381 ttagcaccgg agaagcaaag tttgtttgct accaaacctg gaggtggggc tttggttttg
1441 cttgaggcct gaaaaaatgt aaaaagtctg agagaaacta cttagggcac ttaggaattg
1501 gcaggacttt ctgtgccaca gtaaattaat cttccttctg ttttgtatta tgatgaacgg
1561 ttgctattat atcaagatat attttcaaag aaatggttga aagctctcta tgcttcataa
1621 tgattctttt tccatcttaa aatatggttt tactattaag agccaagatc atgcttggac
1681 agatctttta agaataactt actgagattt attgatttga agattttaaa gatgaatggt
1741 aaaacacact cttaatactg attacatgga ttggacttga attaaatata ttgttacaat
1801 taaactgaaa aaaaaaaaaa aaaaa
//