LOCUS BC005139 3185 bp mRNA linear HUM 25-AUG-2005 DEFINITION Homo sapiens ubiquitin specific peptidase 5 (isopeptidase T), mRNA (cDNA clone MGC:1586 IMAGE:3506801), complete cds. ACCESSION BC005139 VERSION BC005139.2 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 3185) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 3185) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (26-MAR-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Sep 16, 2003 this sequence version replaced BC005139.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: DCTD/DTP cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Institute for Systems Biology http://www.systemsbiology.org contact: amadan@systemsbiology.org Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 7 Row: e Column: 10 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 4507854. FEATURES Location/Qualifiers source 1..3185 /db_xref="H-InvDB:HIT000032241" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:1586 IMAGE:3506801" /tissue_type="Kidney, renal cell adenocarcinoma" /clone_lib="NIH_MGC_14" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..3185 /gene="USP5" /gene_synonym="ISOT" /db_xref="GeneID:8078" /db_xref="MIM:601447" CDS 31..2607 /gene="USP5" /gene_synonym="ISOT" /codon_start=1 /product="USP5 protein" /protein_id="AAH05139.1" /db_xref="GeneID:8078" /db_xref="MIM:601447" /translation="MAELSEEALLSVLPTIRVPKAGDRVHKDECAFSFDTPESEGGLY ICMNTFLGFGKQYVERHFNKTGQRVYLHLRRTRRPKEEDPATGTGDPPRKKPTRLAIG VEGGFDLSEEKFELDEDVKIVILPDYLEIARDGLGGLPDIVRDRVTSAVEALLSADSA SRKQEVQAWDGEVRQVSKHAFSLKQLDNPARIPPCGWKCSKCDMRENLWLNLTDGSIL CGRRYFDGSGGNNHAVEHYRETGYPLAVKLGTITPDGADVYSYDEDDMVLDPSLAEHL SHFGIDMLKMQKTDKTMTELEIDMNQRIGEWELIQESGVPLKPLFGPGYTGIRNLGNS CYLNSVVQVLFSIPDFQRKYVDKLEKIFQNAPTDPTQDFSTQVAKLGHGLLSGEYSKP VPESGDGERVPEQKEVQDGIAPRMFKALIGKGHPEFSTNRQQDAQEFFLHLINMVERN CRSSENPNEVFRFLVEEKIKCLATEKVKYTQRVDYIMQLPVPMDAALNKEELLEYEEK KRQAEEEKMALPELVRAQVPFSSCLEAYGAPEQVDDFWSTALQAKSVAVKTTRFASFP DYLVIQIKKFTFGLDWVPKKLDVSIEMPEELDISQLRGTGLQPGEEELPDIAPPLVTP DEPKGSLGFYGNEDEDSFCSPHFSSPTSPMLDESVIIQLVEMGFPMDACRKAVYYTGN SGAEAAMNWVMSHMDDPDFANPLILPGSSGPGSTSAAADPPPEDCVTTIVSMGFSRDQ ALKALRATNNSLERAVDWIFSHIDDLDAEAAMDISEGRSAADSISESVPVGPKVRDGP GKYQLFAFISHMGTSTMCGHYVCHIKKEGRWVIYNDQKVCASEKPPKDLGYIYFYQRV AS" BASE COUNT 718 a 880 c 941 g 646 t ORIGIN 1 gccgtgtgtg gagaagctgc tgccggtgtc atggcggagc tgagtgagga ggcgctgctg 61 tcagtattac cgacgatccg ggtccctaag gctggagacc gggtccacaa agacgagtgc 121 gccttctcct tcgacacgcc ggagtctgag gggggcctct acatctgtat gaacacgttt 181 ctgggctttg ggaaacagta tgtggagaga catttcaata agaccggcca gcgagtctac 241 ttgcacctcc ggcggacccg gcgcccgaaa gaggaggacc ctgctacagg cactggagac 301 ccaccccgga agaagcccac gcggctggct attggtgttg aaggcggatt tgaccttagc 361 gaggagaagt ttgaattaga cgaggatgtg aagattgtca ttttgccaga ttacctggag 421 attgcccggg atggactggg gggactgcct gacattgtca gagatcgggt gaccagtgca 481 gtggaggccc tactgtcggc cgactcagcc tcccgcaagc aggaggtgca ggcatgggat 541 ggggaagtac ggcaggtgtc taagcatgcc ttcagcctca agcagttgga caaccctgct 601 cgaatccctc cctgtggctg gaagtgctcc aagtgtgaca tgagagagaa cctgtggctc 661 aacctgactg atggctccat cctctgtggg cgacgctact tcgatggcag tgggggcaac 721 aaccacgctg tggagcacta ccgagagaca ggctacccgt tagctgtcaa gctgggcacc 781 atcacccctg atggagctga cgtgtactca tatgatgagg atgacatggt cctggacccc 841 agcctggctg agcacctgtc ccacttcggc atcgacatgc tgaagatgca gaagacagac 901 aagacgatga ctgagttgga gatagacatg aaccagcgga ttggtgaatg ggagctgatc 961 caggagtcag gtgtgccact caagcccctg tttgggcctg gctacacagg catccggaac 1021 ctgggtaaca gctgctacct caactctgtg gtccaggtgc tcttcagcat ccctgacttc 1081 cagaggaagt atgtggataa gctggagaag atcttccaga atgccccgac ggaccctacc 1141 caggatttca gcacccaggt ggccaagctg ggccatggcc ttctctccgg ggagtattcc 1201 aagccagtac cggagtcggg cgatggggag cgggtgccag aacagaagga agttcaagat 1261 ggcattgccc ctcggatgtt caaggccctc atcggcaagg gccaccctga attctccacc 1321 aaccggcagc aggatgccca ggagttcttc cttcacctta tcaacatggt ggagaggaat 1381 tgccggagct ctgaaaatcc taatgaagtg ttccgcttct tggtggagga aaagatcaag 1441 tgcctggcca cagagaaggt gaagtacacc cagcgagttg actacatcat gcagctgcct 1501 gtgcccatgg atgcagccct taacaaagag gagcttctgg agtacgagga gaagaagcgg 1561 caagccgaag aggagaagat ggcactgcca gaactggttc gggcccaggt gcccttcagc 1621 tcttgcctgg aggcctacgg ggcccctgag caggtcgatg acttctggag cacggccctg 1681 caggccaagt cagtagctgt caagaccaca cgatttgcct cattccctga ctacctggtc 1741 atccagatca agaagttcac cttcggctta gactgggtgc ccaagaaact ggatgtgtcc 1801 atcgagatgc cagaggagct cgacatctcc cagttgaggg gcacagggct gcagcccgga 1861 gaggaggagc tgccagacat tgccccaccc ctggtcactc cggatgagcc caaaggtagc 1921 cttggtttct atggcaacga agacgaagac tccttctgct cccctcactt ctcctctccg 1981 acatcgccca tgctggatga atcagtcatc atccagctgg tggagatggg attccctatg 2041 gacgcctgcc gcaaagctgt ctactacacg ggcaacagcg gggctgaggc cgccatgaac 2101 tgggtcatgt cacacatgga tgatccagat tttgcaaacc ccctcatcct gcctggctct 2161 agtgggccgg gctccacaag cgcagcagcc gacccccctc ctgaggactg tgtgaccacc 2221 attgtctcca tgggcttctc ccgggaccag gccttgaaag cgctgcgggc cacgaacaat 2281 agtttagaac gggctgtgga ctggatcttc agtcacattg acgacctgga tgctgaagct 2341 gccatggaca tctcagaggg ccgctcagct gccgactcca tctctgagtc tgtgccagtg 2401 ggacctaaag tccgggatgg tcctggaaag tatcagctct ttgccttcat tagtcacatg 2461 ggcacctcta ccatgtgtgg tcactacgtc tgccacatca agaaagaagg cagatgggtg 2521 atctacaatg accagaaagt gtgtgcctcc gagaagccgc ccaaggacct gggctacatc 2581 tacttctacc agagagtggc cagctaagag cctgcctcac cccttaccaa tgagggcagg 2641 ggaagaccac ctggcatgag ggagaggggc tgagggatgg acttcagccc ctctgctctg 2701 tacccttttt ccttttgtcc ccggcagcag ggaagaagct ggaggccgtg ggagaatggc 2761 tgggcagagc agaggggcag cgatagactc tggggatgga gcaggacggg gacgggaggg 2821 gccggccacc tgtctgtaag gagactttgt tgcttcccct gcccccggaa tccacagtgc 2881 tctgcttctc tgtgtcgccc cgcccagccc cctggtgtgg agggaggggt ctcgtttgtg 2941 cgcgtgggtg tagctttgtg catcctctcc cagtggagcg atcacctgtg cctcccctcc 3001 ccctttgttt gcccctgtgt ggttggtcaa ggagggatgt gagggaaata gggacccccc 3061 gacttgccct cctgcctcag tctttccccc accctgtctc ttccttgtcc ttctctggaa 3121 aatgccaaaa tacacgatgt gaataaaagt acaacggcta aaaaaaaaaa aaaaaaaaaa 3181 aaaaa //