LOCUS BC005119 1668 bp mRNA linear HUM 01-SEP-2006
DEFINITION Homo sapiens ECSIT homolog (Drosophila), mRNA (cDNA clone MGC:4306
IMAGE:2819610), complete cds.
ACCESSION BC005119
VERSION BC005119.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1668)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1668)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (26-MAR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 9 Row: m Column: 7
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 20149632.
FEATURES Location/Qualifiers
source 1..1668
/db_xref="H-InvDB:HIT000032223"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:4306 IMAGE:2819610"
/tissue_type="Lung, small cell carcinoma"
/clone_lib="NIH_MGC_7"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1668
/gene="ECSIT"
/gene_synonym="SITPEC"
/db_xref="GeneID:51295"
/db_xref="HGNC:HGNC:29548"
/db_xref="MIM:608388"
CDS 78..1373
/gene="ECSIT"
/gene_synonym="SITPEC"
/codon_start=1
/product="ECSIT homolog (Drosophila)"
/protein_id="AAH05119.1"
/db_xref="GeneID:51295"
/db_xref="HGNC:HGNC:29548"
/db_xref="MIM:608388"
/translation="MSWVQATLLARGLCRAWGGTCGAALTGTSISQVPRRLPRGLHCS
AAAHSSEQSLVPSPPEPRQRPTKALVPFEDLFGQAPGGERDKASFLQTVQKFAEHSVR
KRGHIDFIYLALRKMREYGVERDLAVYNQLLNIFPKEVFRPRNIIQRIFVHYPRQQEC
GIAVLEQMENHGVMPNKETEFLLIQIFGRKSYPMLKLVRLKLWFPRFMNVNPFPVPRD
LPQDPVELAMFGLRHMEPDLSARVTIYQVPLPKDSTGAADPPQPHIVGIQSPDQQAAL
ARHNPARPVFVEGPFSLWLRNKCVYYHILRADLLPPEEREVEETPEEWNLYYPMQLDL
EYVRSGWDNYEFDINEVEEGPVFAMCMAGAHDQATMAKWIQGLQETNPTLAQIPVVFR
LAGSTRELQTSSAGLEEPPLPEDHQEEDDNLQRQQQGQS"
BASE COUNT 362 a 511 c 497 g 298 t
ORIGIN
1 cgcccagcaa caagacagag ctggcctgga gtccgcggct ggccgcgtga gtaggtgatt
61 gtctgacaag cagaggcatg agctgggtcc aggccaccct actggcccga ggcctctgta
121 gggcctgggg aggcacctgc ggggccgccc tcacaggaac ctccatctct caggtccctc
181 gccggctccc tcggggcctc cactgcagcg cagctgccca tagctctgaa cagtccctgg
241 ttcccagccc accggaaccc cggcagaggc ccaccaaggc tctggtgccc tttgaggacc
301 tgtttgggca ggcgcctggt ggggaacggg acaaggcgag cttcctgcag acggtgcaga
361 aatttgcgga gcacagcgtg cgtaagcggg gccacattga cttcatctac ctggccctgc
421 gcaagatgcg ggagtatggt gtcgagcggg acctggctgt gtacaaccag ctgctcaaca
481 tcttccccaa ggaggtcttc cggcctcgca acatcatcca gcgcatcttc gtccactacc
541 ctcggcagca ggagtgtggg attgctgtcc tggagcagat ggagaaccac ggtgtgatgc
601 ccaacaagga gacggagttc ctgctgattc agatctttgg acgcaaaagc taccccatgc
661 tcaagttggt gcgcctgaag ctgtggttcc ctcgattcat gaacgtcaac cccttcccag
721 tgccccggga cctgccccag gaccctgtgg agctggccat gtttggcctg cggcacatgg
781 agcctgacct tagtgccagg gtcaccatct accaggttcc tttgcccaaa gactcaacag
841 gtgcagcaga tcccccccag ccccacatcg taggaatcca gagtcccgat cagcaggccg
901 ccctggcccg ccacaatcca gcccggcctg tctttgttga gggccccttc tccctgtggc
961 tccgcaacaa gtgtgtgtat taccacatcc tcagagctga cttgctgccc ccggaggaga
1021 gggaagtgga agagacgccg gaggagtgga acctctacta cccgatgcag ctggacctgg
1081 agtatgtgag gagtggctgg gacaactacg agtttgacat caatgaagtg gaggaaggcc
1141 ctgtcttcgc catgtgcatg gcgggtgctc atgaccaggc gacgatggct aagtggatcc
1201 agggcctgca ggagaccaac ccaaccctgg cccagatccc cgtggtcttc cgcctcgccg
1261 ggtccacccg ggagctccag acatcctctg cagggctgga ggagccgccc ctgcccgagg
1321 accaccagga agaagacgac aacctgcagc gacagcagca gggccagagc tagtctgagc
1381 cggcgcgagg gcacgggctg tggcccgagg aggcggtgga ctgaaggcat gagatgccct
1441 ttgagtgtac agcaaatcaa tgttttcctg cttggggctc tcttccctca tctctagcag
1501 tatggcatcc cctccccagg atctcgggct gccagcgatg ggcaggcgag acccctccag
1561 aatctgcagg cgcctctggt tctccgaatt caaataaaaa ggggcgggag cgctgttggt
1621 tgtgcgcaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaa
//