LOCUS BC005115 1115 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens cyclin-dependent kinase 5, mRNA (cDNA clone MGC:1469
IMAGE:3537202), complete cds.
ACCESSION BC005115
VERSION BC005115.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1115)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1115)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (26-MAR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 8 Row: h Column: 11
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 38454327.
FEATURES Location/Qualifiers
source 1..1115
/db_xref="H-InvDB:HIT000032219"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:1469 IMAGE:3537202"
/tissue_type="Lung, small cell carcinoma"
/clone_lib="NIH_MGC_7"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1115
/gene="CDK5"
/gene_synonym="PSSALRE"
/db_xref="GeneID:1020"
/db_xref="HGNC:HGNC:1774"
/db_xref="MIM:123831"
CDS 26..904
/gene="CDK5"
/gene_synonym="PSSALRE"
/codon_start=1
/product="cyclin-dependent kinase 5"
/protein_id="AAH05115.1"
/db_xref="GeneID:1020"
/db_xref="HGNC:HGNC:1774"
/db_xref="MIM:123831"
/translation="MQKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGV
PSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEI
VKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSA
EVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRL
LGTPTEEQWPSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRIS
AEEALQHPYFSDFCPP"
BASE COUNT 254 a 307 c 310 g 244 t
ORIGIN
1 cgcaggggtc cccgcggccg ccgcgatgca gaaatacgag aaactggaaa agattgggga
61 aggcacctac ggaactgtgt tcaaggccaa aaaccgggag actcatgaga tcgtggctct
121 gaaacgggtg aggctggatg acgatgatga gggtgtgccg agttccgccc tccgggagat
181 ctgcctactc aaggagctga agcacaagaa catcgtcagg cttcatgacg tcctgcacag
241 cgacaagaag ctgactttgg tttttgaatt ctgtgaccag gacctgaaga agtattttga
301 cagttgcaat ggtgacctcg atcctgagat tgtaaagtca ttcctcttcc agctactaaa
361 agggctggga ttctgtcata gccgcaatgt gctacacagg gacctgaagc cccagaacct
421 gctaataaac aggaatgggg agctgaaatt ggctgatttt ggcctggctc gagcctttgg
481 gattcccgtc cgctgttact cagctgaggt ggtcacactg tggtaccgcc caccggatgt
541 cctctttggg gccaagctgt actccacgtc catcgacatg tggtcagccg gctgcatctt
601 tgcagagctg gccaatgctg ggcggcctct ttttcccggc aatgatgtcg atgaccagtt
661 gaagaggatc ttccgactgc tggggacgcc caccgaggag cagtggccct ctatgaccaa
721 gctgccagac tataagccct atccgatgta cccggccaca acatccctgg tgaacgtcgt
781 gcccaaactc aatgccacag ggagggatct gctgcagaac cttctgaagt gtaaccctgt
841 ccagcgtatc tcagcagaag aggccctgca gcacccctac ttctccgact tctgtccgcc
901 ctaggccccg ggacccccgg cctccaggct ggggcctggc ctatttaagc cccctcttga
961 gaggggtgag acagtggggg tgcctggtgc gctgtgctcc agcagtgctg ggcccagcca
1021 gggtggggtg cctgagcccg aatttctcac tccctttgtg gactttattt aatttcataa
1081 attggctcct ttcccacaaa aaaaaaaaaa aaaaa
//