LOCUS       BC005113                2904 bp    mRNA    linear   HUM 20-DEC-2004
DEFINITION  Homo sapiens SIN3 homolog B, transcription regulator (yeast), mRNA
            (cDNA clone IMAGE:4040380), partial cds.
ACCESSION   BC005113
VERSION     BC005113.1
KEYWORDS    .
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 2904)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   2  (bases 1 to 2904)
  AUTHORS   Director MGC Project.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-MAR-2001) National Institutes of Health, Mammalian
            Gene Collection (MGC), Cancer Genomics Office, National Cancer
            Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
            USA
  REMARK    NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT     Contact: MGC help desk
            Email: cgapbs-r@mail.nih.gov
            Tissue Procurement: DCTD/DTP/Gazdar
            cDNA Library Preparation: Rubin Laboratory
            cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
            DNA Sequencing by: Genome Sequence Centre,
            BC Cancer Agency, Vancouver, BC, Canada
            info@bcgsc.bc.ca
            Steve Jones, Sarah Barber, Mabel Brown-John, Yaron Butterfield,
            Andy Chan, Steve S. Chand, William Chow, Alison Cloutier, Ruth
            Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
            Kim MacDonald, Amara Masson, Mike R. Mayo, Josh Moran, Ryan Morin,
            Teika Olson, Diana Palmquist, Anca Petrescu, Anna Liisa Prahbu,
            Parvaneh Saeedi, JR Santos, Angelique Schnerch, Ursula Skalska,
            Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie
            Schein, Asim Siddiqui, Rob Holt, Marco Marra.
            
            Clone distribution: MGC clone distribution information can be found
            through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
            Series: IRAL Plate: 18 Row: o Column: 17
            This clone was selected for full length sequencing because it
            passed the following selection criteria: Hexamer frequency ORF
            analysis.
FEATURES             Location/Qualifiers
     source          1..2904
                     /db_xref="H-InvDB:HIT000086465"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /clone="IMAGE:4040380"
                     /tissue_type="Lung, large cell carcinoma"
                     /clone_lib="NIH_MGC_18"
                     /lab_host="DH10B-R"
                     /note="Vector: pOTB7"
     gene            <1..2904
                     /gene="SIN3B"
                     /gene_synonym="KIAA0700"
                     /db_xref="GeneID:23309"
                     /db_xref="MIM:607777"
     CDS             <1..1265
                     /gene="SIN3B"
                     /gene_synonym="KIAA0700"
                     /codon_start=3
                     /product="SIN3B protein"
                     /protein_id="AAH05113.1"
                     /db_xref="GeneID:23309"
                     /db_xref="MIM:607777"
                     /translation="EEKGAFGDAPATEQPPLPPPAPHKPLDDVYSLFFANNNWYFFLR
                     LHQTLCSRLLKIYRQAQKQLLEYRTEKEREKLLCEGRREKGSDPAMELRLKQPSEVEL
                     EEYYPAFLDMVRSLLEGSIDPTQYEDTLREMFTIHAYVGFTMDKLVQNIARQLHHLVS
                     DDVCLKVVELYLNEKKRGAAGGNLSSRCVRAARETSYQWKAERCMADENCFKVMFLQR
                     KGQVIMTIELLDTEEAQTEDPVEVQHLARYVEQYVGTEGASSSPTEGFLLKPVFLQRN
                     LKKFRRRWQSEQARALRGEARSSWKRLVGVESACDVDCRFKLSTHKMVFIVNSEDYMY
                     RRGTLCRAKQVQPLVLLRHHQHFEEWHSRWLEDNVTVEAASLVQDWLMGEEDEDMVPC
                     KTLCETVHVHGLPVTRYRVQYSRRPASP"
BASE COUNT          566 a          908 c          869 g          561 t
ORIGIN      
        1 cagaggagaa gggggccttc ggggatgccc cggccactga gcagccaccc ctgccgcccc
       61 cagccccgca caagcccctg gacgatgtct acagcctatt ttttgccaac aacaactggt
      121 acttcttcct gcgcctgcac cagaccctgt gctccaggct gctgaagatc taccgccagg
      181 cgcagaagca gcttctggag tatcggaccg agaaggagcg ggagaagctg ctgtgtgagg
      241 gccgcaggga gaagggcagc gaccccgcca tggagctgcg gctgaagcag cccagtgaag
      301 tggagctgga ggagtactac ccggccttcc tggacatggt gcggagcctg ctggagggca
      361 gcatcgaccc cacgcagtac gaggacaccc tacgcgagat gttcaccatc catgcctacg
      421 tgggcttcac catggacaag ctggtgcaga acattgcgcg gcagctgcac cacctcgtga
      481 gcgatgacgt ctgcctgaag gtggtggagc tctacctgaa cgagaagaag cggggtgccg
      541 ctggtgggaa cctgtcctcc cgctgcgtcc gcgctgctag ggagaccagc taccagtgga
      601 aggctgagcg ctgcatggcc gacgagaact gcttcaaggt gatgttcctg cagcgcaaag
      661 ggcaggtgat catgaccatc gagctcctgg acaccgagga ggcccagacg gaggaccctg
      721 tggaggtcca gcacctggct cggtacgtgg agcagtatgt ggggaccgag ggcgcgtcca
      781 gctcgcccac tgagggcttc ctcctgaaac ctgtgttcct gcagaggaac ctcaagaagt
      841 tccgccgccg gtggcagagc gagcaggcgc gggccctgcg cggtgaggcc aggagctcct
      901 ggaagcggct ggtgggcgtg gagagcgcct gcgacgtgga ctgccgcttc aagctcagca
      961 ctcacaagat ggtgttcatc gtgaactccg aggactacat gtaccgtcgc gggaccctct
     1021 gccgggccaa gcaggtgcag cccctggtcc tgctccgcca ccaccagcac tttgaggagt
     1081 ggcacagccg ctggctggag gacaatgtga cggtggaggc ggctagcctg gtgcaggact
     1141 ggctgatggg tgaggaggac gaggacatgg taccctgcaa gacgctgtgt gagacagtgc
     1201 acgtgcacgg cctgcccgtg acccgctacc gcgtgcagta cagccgccgc ccggcctcgc
     1261 cctgacccgc cctcatgggc accgggcagg cgcctcacag agcacagacg tgccctcggc
     1321 cttggtcgtg tcggggccgt tttcttgaac gacgtgagag gcatctccca gcccctctgc
     1381 tgccggacag cgcactccag ggcaggacgc cgcccccgtg gctcccggtc tcctgtgggc
     1441 ctgctgtgtg ccaaacctga gctacctgca cccgagccct ggggctcagc cccaccacag
     1501 gggcgggtgg acgtgctggc cgaggaacaa gcaatcatgt ttgcgtcccc gtccgtcaca
     1561 tgtgccaaat ccctggcagg cagatggctc ctgccccata ttcttgccgt gtcttggaaa
     1621 agtcacaggt gacagccctc ctgaggccca cactttggag ggggtccatg tccaagagac
     1681 cctgacaagg aaggagttga gccctgggta ggcttgcttg aaaagtgagt ccttccagaa
     1741 tattctcaga gctgccagaa acatcatctg agggtttggg catcagctct gcctggctgg
     1801 tgttcaggcc ctcagtcact ttggaagtga gaagaaccct tcagccaaac ctttgggatc
     1861 ccattttgaa gtccagagct ggagcaggcg ggcagtgccc tgggagaccc cgctctggat
     1921 aagacaccca accccaactc cagcagctgg actctgggcc cacaagggga gggaccccag
     1981 ccagtattcc ctcagagccg gcacgaccct gctgtggggc ggcgggccca gtcgtgttcc
     2041 tgcagtgggc accctaggcg tatgtgtata cacgcacaga tatttattcc tttcgctttt
     2101 agtggttgtt atttctgtag cagccaagtc ctgcggctcc ctggggctga gatctccctt
     2161 tgtggaactc cgagagccgc cctgacagtc ccagccgcca cccaaggagc cccatccgcc
     2221 cacccaccct gggacccacg cggccactcc agggatcatt gttgtccttt tgtgaggggc
     2281 tgaggcgact gtcccatgga ggcatccaag gctttctgtg ccaagaatcc caagtgactg
     2341 gggctgggga ccacttctcc aggcctctct ccccgaccat gagagcccct ggccctggcc
     2401 cctgcacacc agtaggccca gaataaccgc cacccttgcc atcctgcaac agctggactc
     2461 aagtttccag gaagtggaga tgtgtttcta gaagtttcct gtggaacctg gaggctcctg
     2521 atgcctttga ctccaggctg ggcgattccg atgctgaccc gtcctcctgg gctccccacc
     2581 cccgctcccc aagtgtcaca caggcacttt gtacacatcc tggttttcta agaagggaac
     2641 ttgccatcaa gattcctgta ccaggcccac ggccgtctcg ggcagagcca cctgggcccc
     2701 gggtgcagcc ggagaccccg ccgagcccct cctcccagta ttcccatccc cgcatgcttc
     2761 tagggagcgc ctcttttccg ttcttgagga atttctgttc tggggcttgt ccttcctttg
     2821 cagctgtttt gaatgtagtt ttccttttct atttatttgc acattaaagt taataattga
     2881 atattgaaaa aaaaaaaaaa aaaa
//