LOCUS BC005102 926 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens chromosome 1 open reading frame 57, mRNA (cDNA clone
MGC:13186 IMAGE:3619026), complete cds.
ACCESSION BC005102
VERSION BC005102.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 926)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 926)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (26-MAR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 18 Row: g Column: 23
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 14150099.
FEATURES Location/Qualifiers
source 1..926
/db_xref="H-InvDB:HIT000032214"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:13186 IMAGE:3619026"
/tissue_type="Skin, melanotic melanoma."
/clone_lib="NIH_MGC_20"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..926
/gene="C1orf57"
/gene_synonym="MGC13186"
/gene_synonym="RP4-659I19.2"
/gene_synonym="RP4-678E16.2"
/db_xref="GeneID:84284"
/db_xref="HGNC:HGNC:28204"
CDS 88..660
/gene="C1orf57"
/gene_synonym="MGC13186"
/gene_synonym="RP4-659I19.2"
/gene_synonym="RP4-678E16.2"
/codon_start=1
/product="chromosome 1 open reading frame 57"
/protein_id="AAH05102.1"
/db_xref="GeneID:84284"
/db_xref="HGNC:HGNC:28204"
/translation="MARHVFLTGPPGVGKTTLIHKASEVLKSSGVPVDGFYTEEVRQG
GRRIGFDVVTLSGTRGPLSRVGLEPPPGKRECRVGQYVVDLTSFEQLALPVLRNADCS
SGPGQRVCVIDEIGKMELFSQLFIQAVRQTLSTPGTIILGTIPVPKGKPLALVEEIRN
RKDVKVFNVTKENRNHLLPDIVTCVQSSRK"
BASE COUNT 253 a 215 c 236 g 222 t
ORIGIN
1 gtcgcgaccc tggtccggac ctgacctgaa ttgcgacccc aacctggact gctcccctga
61 ccgcaacccc tacccccgcc caccagtatg gcccggcacg tgttcctaac ggggccccca
121 ggagttggaa aaacaacatt gatccataaa gccagtgagg ttttaaaatc ctctggtgtg
181 cctgttgatg gattttatac cgaagaagtc agacagggag ggagaagaat aggattcgat
241 gtcgtcacgt tgtccggcac ccgggggcct ttatcgagag ttgggttaga gcctccacct
301 ggaaaacgtg aatgccgagt tgggcagtat gtggtcgacc tgacttcttt tgagcagttg
361 gcactacccg tcttgaggaa tgccgactgc agcagtggcc cagggcaaag agtgtgcgtc
421 atcgatgaga ttgggaagat ggagctcttc agtcagcttt tcattcaagc tgttcgtcag
481 acgctgtcta ccccagggac tataatcctt ggcacaatcc cagttcctaa aggaaagcca
541 ctggctcttg tagaagaaat cagaaacaga aaggatgtga aggtgtttaa tgtcaccaag
601 gaaaacagaa accaccttct gccagatatc gtgacgtgcg tgcagagcag caggaagtga
661 agacacgtgc attcctgcct tccgtgaagg agtgcccagt tcaagaggag cctgatggag
721 ccctgcctgt cgaggctgta tgcctatggg gttatggaac cttgtgggct tttctagaga
781 aaactcaaca gctgtttccc ataaaatgtt taaaagatca aattagcctt aatgctggat
841 tgtctgtaca agattaacta tccattgtgg cttatctatg cttaaagatt tcttgtttat
901 ttaaaaaaaa aaaaaaaaaa aaaaaa
//