LOCUS BC005094 2226 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens transmembrane protein 79, mRNA (cDNA clone MGC:13102
IMAGE:3955668), complete cds.
ACCESSION BC005094
VERSION BC005094.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2226)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2226)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (26-MAR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 18 Row: m Column: 8
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 14150097.
FEATURES Location/Qualifiers
source 1..2226
/db_xref="H-InvDB:HIT000032211"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:13102 IMAGE:3955668"
/tissue_type="Skin, melanotic melanoma."
/clone_lib="NIH_MGC_20"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2226
/gene="TMEM79"
/gene_synonym="FLJ16057"
/gene_synonym="FLJ32254"
/gene_synonym="MGC13102"
/db_xref="GeneID:84283"
/db_xref="HGNC:HGNC:28196"
CDS 162..1346
/gene="TMEM79"
/gene_synonym="FLJ16057"
/gene_synonym="FLJ32254"
/gene_synonym="MGC13102"
/codon_start=1
/product="transmembrane protein 79"
/protein_id="AAH05094.1"
/db_xref="GeneID:84283"
/db_xref="HGNC:HGNC:28196"
/translation="MTEQETLALLEVKRSDSPEKSSPQALVPNGRQPEGEGGAESPGA
ESLRVGSSAGSPTAIEGAEDGLDSTVSEAATLPWGTGPQPSAPFPDPPGWRDIEPEPP
ESEPLTKLEELPEDDANLLPEKAARAFVPIDLQCIERQPQEDLIVRCEAGEGECRTFM
PPRVTHPDPTERKWAEAVVRPPGCSCGGCGSCGDREWLRAVASVGAALILFPCLLYGA
YAFLPFDVPRLPTMSSRLIYTLRCGVFATFPIVLGILVYGLSLLCFSALRPFGEPRRE
VEIHRRYVAQSVQLFILYFFNLAVLSTYLPQDTLKLLPLLTGLFAVSRLIYWLTFAVG
RSFRGFGYGLTFLPLLSMLMWNLYYMFVVEPERMLTATESRLDYPDHARSASDYRPRP
WG"
BASE COUNT 451 a 655 c 644 g 476 t
ORIGIN
1 ggcagcatgg cgtctttccg gcttctccaa acccttgcga aaaactttat tggcaaagct
61 atcagagaac ggacagtgta cccactgagg cggccaaagc ttaactggat cagggcagga
121 tgacatgacc ttgtggtaga tcccagaact gaggccccag gatgacagaa caggagaccc
181 tggccctact ggaagtgaag aggtctgatt ccccagagaa gagctcaccc caggccttgg
241 ttcccaatgg ccggcagcca gaaggggaag gtggggccga atccccggga gctgagtccc
301 tcagagtggg gtcttcagct ggatctccca cagccataga gggggctgag gatggtctag
361 acagcacagt aagtgaggct gccaccttgc cctgggggac tggccctcag cccagtgctc
421 cgttcccgga tccccctggc tggcgggaca ttgaaccaga gccccctgag tcagaaccac
481 ttaccaagct agaggagctg cccgaagacg atgccaacct gctgcctgag aaagcggccc
541 gtgccttcgt gcctattgac ctacagtgca ttgagcggca gccccaagaa gaccttatcg
601 tgcgctgtga ggcaggcgag ggcgagtgcc gaaccttcat gcccccccgg gtcacccacc
661 ccgaccccac tgagcgcaag tgggctgagg cagtggtgag gccgcctggc tgttcctgtg
721 ggggctgcgg gagctgtgga gaccgtgagt ggctaagggc tgtggcctcc gtgggagccg
781 cactcattct cttcccttgc ctactatacg gggcatatgc cttcctgccg tttgatgtcc
841 cacggctgcc caccatgagt tcccgcctga tctacacact gcgctgcggg gtctttgcca
901 ccttccccat tgtgctgggg atcctggtgt acgggctgag cctgttatgc ttttctgccc
961 ttcggccctt tggggagcca cggcgggagg tggagatcca ccggcgatat gtggcccagt
1021 cggtccagct ctttattctc tacttcttca acctggccgt gctttccact tacctgcccc
1081 aggataccct caaactgctc cctctgctca ctggtctctt tgccgtctcc cggctgatct
1141 actggctgac ctttgccgtg ggccgctcct tccgaggctt cggctacggc ctgacgtttc
1201 tgccactgct gtcgatgctg atgtggaacc tctactacat gttcgtggtg gagccggagc
1261 gcatgctcac tgccaccgag agccgcctgg actacccgga ccacgcccgc tcggcctccg
1321 actacaggcc ccgcccctgg ggctgagcct ctccgccctc gccctcggag tagggggtag
1381 cggcttgggt ctgacacatc tttgaacctt gtggccaggc ctggacttcg cccccaggcc
1441 taggaccgcg gtgggtggaa ccctgctact gccccaacag ggactccaat caatcggagt
1501 tctccccttg ccggagctgc ccttcacctt tggggcccga gacagtcata agggatggac
1561 ttagttttct tgcagggaaa aaggtggaca gccgtgtttc ttaaggatgc tgagggcatg
1621 gggccaggac caggggagag gcacagctcc ttcctgagca gcctctcacc actgccacaa
1681 ggctccctaa tgctggtctc tgctccactc cccggcttcc cgtgaggcag gaggcagagc
1741 cacagccaag gccctgacca cttctgtgcc agttgtctaa gcagagcgcc tcagggacgc
1801 tggaaatgcc ttaaggatag aggctgggca tcacatcaaa tgggactgtg gtgtttggtg
1861 aaaaccttcc tgaggatctg gattcaggac cctccatgac tggcctattt actgtttaca
1921 gctggccagt gcagagctgc tgctctttta cctttttagg cccctgtaac ttcccacctt
1981 taaactgccc agaaggcatg cctctcccac aggaagaggg gagcagacag ggaaatctgc
2041 ctaccaagag gggtgtgtgt gtctttgtgc ccacacgtgg tggctgggga gtgcctggat
2101 ggtgcggtgg ttgatgttaa cctagtgtgt gtgtgtgtgt gtgtgtgtgt gtgtgtaaca
2161 ataaattact accagtcaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
2221 aaaaaa
//