LOCUS BC005081 1451 bp mRNA linear HTC 27-OCT-2008 DEFINITION Homo sapiens brevican, mRNA (cDNA clone IMAGE:3618761), with apparent retained intron. ACCESSION BC005081 VERSION BC005081.1 KEYWORDS HTC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1451) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1451) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (26-MAR-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC/DCTD/DTP cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 18 Row: g Column: 21 This clone has the following problem: retained intron. FEATURES Location/Qualifiers source 1..1451 /db_xref="H-InvDB:HIT000086449" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:3618761" /tissue_type="Skin, melanotic melanoma." /clone_lib="NIH_MGC_20" /lab_host="DH10B-R" /note="Vector: pOTB7" BASE COUNT 315 a 393 c 496 g 247 t ORIGIN 1 ggtgcccctt ggacttgacg ccaatctctt ggtcctatta gaaccatgta ggcagagcta 61 ttccaatagg tgggggaata cctgacagga tatggaaata cctgggagag ggaattccca 121 ggcccctggc agtgctagga aggaatgcaa tagtggtaac cgaattccag ctaatagtta 181 ctgatgtcta cctgagccag ttctcctaaa tgcttcctgt ggataacctc aactgtgaga 241 aaaagattgt ttatgttttg ctcattacac cgatgaggaa cccgaggttc agagaagtca 301 actaactacc ccaaggtcac agagcaagga gccgagttgg gattccagcc gaaatgggca 361 ctccgaccac cccctagagc ggctctgatc ggctgtcctg ccggactaca gtaaggtgtc 421 cccagaaggg ttgctggccg ctgctcctgg agctgcctgt gcgtgggggc acggaggcaa 481 ggactgatcc ggaacgctac cgccctgcct gggacaaggt cggaaatctc ggcggccgcg 541 ctgggacagg agcgcgcagc agggaagatg cgaggacccg aggggttgct gatcagactg 601 cgagcagcag gggggctgcc actggcagag ctggaagcat gtagatcaga gatggcagca 661 gcagctgcag gcgctcgggg ctgtccagca gcctaccccg ctgcggtgtc aggagtcgac 721 gagttgggtg ccccagagcc tcgaggcaag ggctgacagg cggggggcgc agaccaggca 781 ggcactccct tctccctgtc cccgacccca cggcgggcgg cggggctgcg gaggcactca 841 cctacccagg gctggggttg ggtcgcggca ctgcgaagtt tgtcgcctcc tccgggggtc 901 tcctccgggt gcacggctca gtcctgcagc tgcagctgag actgcggcgg agactgcgcg 961 agcgtgagga gaggctgggg ccgcaggaca ttcggaagag ggcgccggcc ctcccggcgc 1021 agcacaaaac cccctttctt ccccccgccc ctgccccgcc ctccccgggg ccgcccccgc 1081 cccctggtcg ggagcgcggg gctctcggga cggtcacggg acccgctgcc ttctctgctt 1141 cggctccggc agcagcggcg agagcaagga cgagcgaagt aggacatcgt tcagcggatg 1201 agaagccgag ggcttggagt agggaggagg ggcaggaggg gcggggaggg agcgttcgcc 1261 cagcgttcgc tgagctaaag gatgacgatg ttgcagctgg aggggtggaa gttggacaac 1321 tggagagtct tctcgttgtt caaagaagaa ggaggaggga gtcaattaga ctgtaagaag 1381 tggatgaagg gagaatgggg gctttgctcc tgaaaagaga caccctttct aataaaaaaa 1441 aaaaaaaaaa a //