LOCUS BC005044 1663 bp mRNA linear HUM 03-OCT-2003
DEFINITION Homo sapiens nuclear factor (erythroid-derived 2), 45kDa, mRNA
(cDNA clone MGC:12809 IMAGE:4040433), complete cds.
ACCESSION BC005044
VERSION BC005044.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1663)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1663)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (26-MAR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP/Gazdar
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Steven Jones, Jennifer Asano, Ian Bosdet, Yaron Butterfield,
Susanna Chan, Readman Chiu, Chris Fjell, Erin Garland, Ran Guin,
Letticia Hsiao, Martin Krzywinski, Reta Kutsche, Oliver Lee, Soo
Sen Lee, Victor Ling, Carrie Mathewson, Candice McLeavy, Steven
Ness, Pawan Pandoh, Anna-Liisa Prabhu, Parvaneh Saeedi, Jacqueline
Schein, Duane Smailus, Michael Smith, Lorraine Spence, Jeff Stott,
Michael Thorne, Miranada Tsai, Natasja van den Bosch, Jill Vardy,
George Yang, Scott Zuyderduyn, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 18 Row: o Column: 19
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 5453773.
FEATURES Location/Qualifiers
source 1..1663
/db_xref="H-InvDB:HIT000032178"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:12809 IMAGE:4040433"
/tissue_type="Lung, large cell carcinoma"
/clone_lib="NIH_MGC_18"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1663
/gene="NFE2"
/gene_synonym="NF-E2"
/gene_synonym="p45"
/db_xref="GeneID:4778"
/db_xref="MIM:601490"
CDS 264..1385
/gene="NFE2"
/gene_synonym="NF-E2"
/gene_synonym="p45"
/codon_start=1
/product="NFE2 protein"
/protein_id="AAH05044.1"
/db_xref="GeneID:4778"
/db_xref="MIM:601490"
/translation="MSPCPPQQSRNRVIQLSTSELGEMELTWQEIMSITELQGLNAPS
EPSFEPQAPAPYLGPPPPTTYCPCSIHPDSGFPLPPPPYELPASTSHVPDPPYSYGNM
AIPVSKPLSLSGLLSEPLQDPLALLDIGLPAGPPKPQEDPESDSGLSLNYSDAESLEL
EGTEAGRRRSEYVEMYPVEYPYSLMPNSLAHSNYTLPAAETPLALEPSSGPVRAKPTA
RGEAGSRDERRALAMKIPFPTDKIVNLPVDDFNELLARYPLTESQLALVRDIRRRGKN
KVAAQNCRKRKLETIVQLERELERLTNERERLLRARGEADRTLEVMRQQLTELYRDIF
QHLRDESGNSYSPEEYALQQAADGTIFLVPRGTKMEATD"
BASE COUNT 381 a 513 c 443 g 326 t
ORIGIN
1 gtgcgcctgc ttggggctcc tgtgctcagc tcagcctgag cttccacact cagcgctcag
61 caatggcccg ggggcggggc gcggtcctcg cagattctca aaggtagccg ggatcctcgt
121 ccagcagtgt cagctcaggc tcagcctccc cagagacaac accgggagcc tcatctctct
181 cctcaccctg ctgtgactcc accacaggtt tctagagcca tctgggcttt ccgggaacct
241 ggaccagact ctggcccagt aggatgtccc cgtgtcctcc ccagcagagc aggaacaggg
301 tgatacagct gtccacttca gagctaggag agatggaact gacttggcag gagatcatgt
361 ccatcaccga gctgcagggt ctgaatgctc caagtgagcc atcatttgag ccccaagccc
421 cagctccata ccttggacct ccaccaccca caacttactg cccctgctca atccacccag
481 attctggctt cccacttcct ccaccacctt atgagctccc agcatccaca tcccatgtcc
541 cagatccccc atactcctat ggcaacatgg ccataccagt ctccaagcca ctgagcctct
601 caggcctgct cagtgagccg ctccaagacc ccttagccct cctggacatt gggctgccag
661 cagggccacc taagccccaa gaagacccag aatccgactc aggattatcc ctcaactata
721 gcgatgctga atctcttgag ctggagggga cagaggctgg tcggcggcgc agcgaatatg
781 tagagatgta cccagtggag tacccctact cactcatgcc caactccttg gcccactcca
841 actatacctt gccagctgct gagaccccct tggccttaga gccctcctca ggccctgtgc
901 gggctaagcc cactgcacgg ggggaggcag ggagtcggga tgaacgtcgg gccttggcca
961 tgaagattcc ttttcctacg gacaagattg tcaacttgcc ggtagatgac tttaatgagc
1021 tattggcaag gtacccgctg acagagagcc agctagcgct agtccgggac atccgacgac
1081 ggggcaaaaa caaggtggca gcccagaact gccgcaagag gaagctggaa accattgtgc
1141 agctggagcg ggagctggag cggctgacca atgaacggga gcggcttctc agggcccgcg
1201 gggaggcaga ccggaccctg gaggtcatgc gccaacagct gacagagctg taccgtgaca
1261 ttttccagca ccttcgggat gaatcaggca acagctactc tcctgaagag tacgcgctgc
1321 aacaggctgc cgatgggacc atcttccttg tgccccgggg gaccaagatg gaggccacag
1381 actgagctgg cccagagggg tggaactgct gatgggattt ccttcattcc cttctgataa
1441 aggtactccc caaccctgag tcccagaagg agctgagttc tctagaccag aagaggatga
1501 caatggcaac aagtgtttgg aagttccaag gtgtgttcaa agaggcttgc cttgagggag
1561 ggctggaatc tgtcttccct gactcggctc ctcaggtctt tagcctccac cttgtctaag
1621 ctttggtcta taaagtgcgc tacagaaaaa aaaaaaaaaa aaa
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