LOCUS BC005035 1565 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens RAB3B, member RAS oncogene family, mRNA (cDNA clone MGC:12720 IMAGE:4040566), complete cds. ACCESSION BC005035 VERSION BC005035.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1565) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1565) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (26-MAR-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: DCTD/DTP/Gazdar cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 18 Row: o Column: 21 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 19923749. FEATURES Location/Qualifiers source 1..1565 /db_xref="H-InvDB:HIT000032174" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:12720 IMAGE:4040566" /tissue_type="Lung, large cell carcinoma" /clone_lib="NIH_MGC_18" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..1565 /gene="RAB3B" /db_xref="GeneID:5865" /db_xref="HGNC:HGNC:9778" /db_xref="MIM:179510" CDS 126..785 /gene="RAB3B" /codon_start=1 /product="RAB3B, member RAS oncogene family" /protein_id="AAH05035.1" /db_xref="GeneID:5865" /db_xref="HGNC:HGNC:9778" /db_xref="MIM:179510" /translation="MASVTDGKTGVKDASDQNFDYMFKLLIIGNSSVGKTSFLFRYAD DTFTPAFVSTVGIDFKVKTVYRHEKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMY DITNEESFNAVQDWATQIKTYSWDNAQVILVGNKCDMEEERVVPTEKGQLLAEQLGFD FFEASAKENISVRQAFERLVDAICDKMSDSLDTDPSMLGSSKNTRLSDTPPLLQQNCS C" BASE COUNT 385 a 449 c 389 g 342 t ORIGIN 1 cctgaccgga ccagaccatc ccgcagcgcc ccgccccggc cccctccgcg ccctcccgac 61 gccaggtcct gccgtcccgc cgaccgtccg ggagcgaacc cgtcgtcccg cactcggagt 121 ccgcgatggc ttcagtgaca gatggtaaaa ctggagtcaa agatgcctct gaccagaatt 181 ttgactacat gtttaaactg cttatcattg gcaacagcag tgttggcaag acctccttcc 241 tcttccgcta tgctgatgac acgttcaccc cagccttcgt tagcaccgtg ggcatcgact 301 tcaaggtgaa gacagtctac cgtcacgaga agcgggtgaa actgcagatc tgggacacag 361 ctgggcagga gcggtaccgg accatcacaa cagcctatta ccgtggggcc atgggcttca 421 ttctgatgta tgacatcacc aatgaagagt ccttcaatgc tgtccaagac tgggctactc 481 agatcaagac ctactcctgg gacaatgcac aagttattct ggtggggaac aagtgtgaca 541 tggaggaaga gagggttgtt cccactgaga agggccagct ccttgcagag cagcttgggt 601 ttgatttctt tgaagccagt gcaaaggaga acatcagtgt aaggcaggcc tttgagcgcc 661 tggtggatgc catttgtgac aagatgtctg attcgctgga cacagacccg tcgatgctgg 721 gctcctccaa gaacacgcgt ctctcggaca ccccaccgct gctgcagcag aactgctcat 781 gctaggcaag gcccaccttc ctgacctccc ctcattgtgg ccccacaccc agtctgcttc 841 tccctgttac acactgtccg ctctcagccc actctccctg ttacacactg cccacactca 901 gagcaagatg agttgctgct attctttgcc tgcccctggg gttctctgca gatggtccca 961 gtaatagata ctcagcacta gactaacata acaggtcact acacgggtgc agaatcactt 1021 tacaaaagaa gactctgttt tacgaagggg attcactaca gggacttaga gaacagtctc 1081 ttttctgcct ttaaaatgag agttcctcca tttaccaaaa tttgacacgc acacattctt 1141 caggggcatg ccaattgcgt aaagtgaggc tcgcctgcat agctaatcct gttaaagaca 1201 acttctcaaa gcacaacgtg cttgtttcct atcgggctcc ctgcggggct ttctctcact 1261 acaagtcaag cttgggctct caaagccctg cgcctgttac cacggatgcc cacagggcct 1321 gggcagttgc tgtggcgaca ggaagagcta atcttcagag agctcagact ctctaatgat 1381 gctgaaggag caaaggctga gtcagaaaca cacttaagag aaaaggattg gccgggcgcg 1441 gtggctcacg cctgtaatcc cagcactttg ggaggccgag gcgggtggat catgaggtca 1501 ggagatcgag accatcctgg ctaacaaggt gaaaccccgt ctctactaaa aaaaaaaaaa 1561 aaaaa //