LOCUS BC005013 1799 bp mRNA linear HUM 19-OCT-2006
DEFINITION Homo sapiens terminal uridylyl transferase 1, U6 snRNA-specific,
mRNA (cDNA clone IMAGE:2959661), partial cds.
ACCESSION BC005013
VERSION BC005013.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1799)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1799)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (26-MAR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 13 Row: i Column: 1.
FEATURES Location/Qualifiers
source 1..1799
/db_xref="H-InvDB:HIT000032158"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:2959661"
/tissue_type="Colon, adenocarcinoma"
/clone_lib="NIH_MGC_15"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene <1..1799
/gene="TUT1"
/gene_synonym="FLJ21850"
/gene_synonym="FLJ22267"
/gene_synonym="FLJ22347"
/gene_synonym="PAPD2"
/gene_synonym="TUTase"
/db_xref="GeneID:64852"
/db_xref="HGNC:HGNC:26184"
CDS <1..1739
/gene="TUT1"
/gene_synonym="FLJ21850"
/gene_synonym="FLJ22267"
/gene_synonym="FLJ22347"
/gene_synonym="PAPD2"
/gene_synonym="TUTase"
/codon_start=3
/product="TUT1 protein"
/protein_id="AAH05013.2"
/db_xref="GeneID:64852"
/db_xref="HGNC:HGNC:26184"
/translation="ETLASPQSLPPASPLLEDREEGDLGKASELAETPKEEKAEGAAM
LELVGSILRGCVPGVYRVQTVPSARRPVVKFCHRPSGLHGDVSLSNRLALHNSRFLSL
CSELDGRVRPLVYTLRCWAQGRGLSGSGPLLSNYALTLLVIYFLQTRDPPVLPTVSQL
TQKAGEGEQVEVDGWDCSFPRDASRLEPSINVEPLSSLLAQFFSCVSCWDLRGSLLSL
REGQALPVAGGLPSNLWEGLRLGPLNLQDPFDLSHNVAANVTSRVAGRLQNCCRAAAN
YCRSLQYQRRSSRGRDWGLLPLLQPSSPSSLLSATPIPLPLAPFTQLTAALVQVFREA
LGCHIEQATKRTRSEGGGTGESSQGGTSKRLKVDGQKNCCEEGKEEQQGCAGDGGEDR
VEEMVIEVGEMVQDWAMQSPGQPGDLPLTTGKHGAPGEEGQPSHAALAERGPKGHEAA
QEWSQGEAGKGASLPSSASWRCALWHRVWQGRRRARRRLQQQTKEGAGGGAGTRAGWL
ATEAQVTQELKGLSGGEERPETEPLLSFVASVSPADRMLTVTPLQDPQGLFPDLHHFL
QVFLPQAIRHLK"
BASE COUNT 373 a 517 c 567 g 342 t
ORIGIN
1 ccgagaccct tgcttctccc cagtctctgc ctccagcttc accactgcta gaggacaggg
61 aagaggggga cctggggaag gcctcggaac tagcagagac cccaaaggag gagaaagcag
121 agggggcagc aatgctggag ctggtgggat ccattctccg gggctgtgtc cctggggtgt
181 atcgagtcca aactgtgccc tctgcccggc gccctgtggt caagttctgt catcggcctt
241 caggtctcca cggtgatgtc tccctcagta accggctggc cctgcataac tcccgtttcc
301 tgagtctctg ctctgagctg gatggtcgag tccggcccct cgtgtacacc ctccgctgct
361 gggctcaggg tcgggggctg tcagggagtg gcccccttct cagtaactac gccctgacct
421 tgctggtgat ctattttctt cagaccaggg accctcctgt gttgcccact gtgtcccagc
481 tcacccagaa agcaggagag ggggaacagg tggaagtcga tggctgggac tgcagtttcc
541 ccagggatgc ctcaagactg gagcccagca taaatgtgga gcccctcagt tccctgctag
601 cccagttctt ctcctgtgta tcttgttggg atcttcgtgg ctccctgctg tccctgcggg
661 agggtcaggc actgcctgtg gcagggggcc tgccttctaa tctctgggag ggtctgcgcc
721 ttggccccct gaatctccag gacccttttg acctgagtca caatgtcgca gccaatgtga
781 ccagccgggt ggctgggcgc ctacagaact gctgccgagc agcagccaat tactgccgaa
841 gcctccagta ccagcgccgt tcctcccggg gtcgggactg ggggctgctc cctcttctgc
901 agcccagctc ccccagctcc ctgctctctg ctacgccgat ccctttaccc cttgcaccct
961 tcacccagct cactgctgcc ctggtgcagg tattcaggga agcactgggg tgccatatag
1021 aacaggcaac caagagaacg cggtcagaag gaggtggaac tggggagtcc tctcagggag
1081 ggacaagcaa aagactcaaa gtagatggac agaaaaactg ctgtgaggag gggaaagagg
1141 agcagcaggg atgtgcaggg gacggtgggg aagacagggt agaagagatg gttatagagg
1201 ttggagagat ggtgcaggac tgggccatgc agagccctgg gcagccaggg gacctgcccc
1261 tgaccactgg aaagcatgga gcccctggag aagaggggca gcccagccac gcagccctgg
1321 cagagcgggg gcccaaggga catgaggcag cccaagaatg gtctcagggt gaggcaggga
1381 agggggcatc cctgccctcc tcagcgagct ggcgctgtgc cttgtggcac cgagtgtggc
1441 aagggcggcg gcgagcccgt agacgcttgc agcagcaaac caaggaggga gctggaggtg
1501 gcgctggcac aagagcaggg tggctggcga ctgaggctca ggtcacccag gagctgaaag
1561 gactgagtgg tggcgaagag aggccagaaa ctgagcccct gctgagcttt gtggcgtctg
1621 tctccccggc tgaccgaatg ctcactgtga ccccgctcca ggatccccaa ggcctgttcc
1681 ctgatctcca tcatttctta caggttttcc tccctcaagc aattcgacat ctcaagtgaa
1741 gacatggccc ctgaagggca ataaagctgc tagtttatta aaaaaaaaaa aaaaaaaaa
//