LOCUS BC005003 1459 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens nuclear transcription factor Y, gamma, mRNA (cDNA
clone MGC:792 IMAGE:3502903), complete cds.
ACCESSION BC005003
VERSION BC005003.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1459)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1459)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (21-MAR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 6 Row: h Column: 14
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 11496977.
FEATURES Location/Qualifiers
source 1..1459
/db_xref="H-InvDB:HIT000032149"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:792 IMAGE:3502903"
/tissue_type="Brain, neuroblastoma"
/clone_lib="NIH_MGC_19"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1459
/gene="NFYC"
/gene_synonym="CBF-C"
/gene_synonym="CBFC"
/gene_synonym="H1TF2A"
/gene_synonym="HAP5"
/gene_synonym="hCBF-C"
/gene_synonym="HSM"
/gene_synonym="NF-YC"
/db_xref="GeneID:4802"
/db_xref="HGNC:HGNC:7806"
/db_xref="MIM:605344"
CDS 156..1163
/gene="NFYC"
/gene_synonym="CBF-C"
/gene_synonym="CBFC"
/gene_synonym="H1TF2A"
/gene_synonym="HAP5"
/gene_synonym="hCBF-C"
/gene_synonym="HSM"
/gene_synonym="NF-YC"
/codon_start=1
/product="nuclear transcription factor Y, gamma"
/protein_id="AAH05003.1"
/db_xref="GeneID:4802"
/db_xref="HGNC:HGNC:7806"
/db_xref="MIM:605344"
/translation="MSTEGGFGGTSSSDAQQSLQSFWPRVMEEIRNLTVKDFRVQELP
LARIKKIMKLDEDVKMISAEAPVLFAKAAQIFITELTLRAWIHTEDNKRRTLQRNDIA
MAITKFDQFDFLIDIVPRDELKPPKRQEEVRQSVTPAEPVQYYFTLAQQPTAVQVQGQ
QQGQQTTSSTTTIQPGQIIIAQPQQGQTTPVTMQVGEGQQVQIVQAQPQGQAQQAQSG
TGQTMQVMQQIITNTGEIQQIPVQLNAGQLQYIRLAQPVSGTQVVQGQIQTLATNAQQ
ITQTEVQQGQQQFSQFTDGQQLYQIQQVTMPAGQDLAQPMFIQSANQPSDGQAPQVTG
D"
BASE COUNT 383 a 428 c 357 g 291 t
ORIGIN
1 catcttgctt gtgcccccgc ttcgcgcgcg ctccgttctc cgtgacgcac acttccccct
61 cccctccgcc gcgcctgggc ctctgcattg cccgactccg taggagcgcg ggggcggctc
121 ctgctcttcc tggactcctg agcagagttg tcgagatgtc cacagaagga ggatttggtg
181 gtactagcag cagtgatgcc cagcaaagcc tacagtcgtt ctggcctcgg gtcatggaag
241 aaatccggaa tttaacagtg aaagacttcc gagtgcagga actcccactg gctcgtatta
301 agaagattat gaaactggat gaagatgtga agatgatcag tgcagaagcg cctgtactct
361 ttgccaaggc agcccagatt tttatcacag agttgactct tcgagcctgg attcacacag
421 aagataacaa gcgccggact ctacagagaa atgatatcgc catggcaatt acaaaatttg
481 atcagtttga ttttctcatc gatattgttc caagagatga actgaaacct ccaaagcgtc
541 aggaggaggt gcgccagtct gtaactcctg ccgagccagt ccagtactat ttcacgctgg
601 ctcagcaacc caccgctgtc caagtccagg gccagcagca aggccagcag accaccagct
661 ccacgaccac catccagcct gggcagatca tcatcgcaca gcctcagcag ggccagacca
721 cacctgtgac aatgcaggtt ggagaaggtc agcaggtgca gattgtccag gctcagccac
781 agggtcaagc ccaacaggcc cagagtggca ctggacagac catgcaggtg atgcagcaga
841 tcatcactaa cacaggagag atccagcaga tcccggtgca gctgaatgcc ggccagctgc
901 agtatatccg cttagcccag cctgtatcag gcactcaagt tgtgcaggga cagatccaga
961 cacttgccac caatgctcaa cagattacac agacagaggt ccagcaagga cagcagcagt
1021 tcagccagtt cacagatgga cagcagctct accagatcca gcaagtcacc atgcctgcgg
1081 gccaggacct cgcccagccc atgttcatcc agtcagccaa ccagccctcc gacgggcagg
1141 ccccccaggt gaccggcgac tgagggcctg agctggcaag gccaaggaca cccaacacaa
1201 tttttgccat acagccccag gcaatgggca cagccttcct ccccagagga cccggccgac
1261 ctcagcgcct cctgcaggct aggacactgg tgcactacac cccatgcctg ggggccgaga
1321 ttctccagca gaaagatgca atattttttg tttccttttt ttccattttt ttctctaagg
1381 aatcaatatt tcaatatgtt gagtgtgtgt ccaatgctat gaaattaaaa tattaaataa
1441 caaaaaaaaa aaaaaaaaa
//