LOCUS BC004996 1936 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens adaptor-related protein complex 2, mu 1 subunit, mRNA
(cDNA clone MGC:4417 IMAGE:2958005), complete cds.
ACCESSION BC004996
VERSION BC004996.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1936)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1936)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (21-MAR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 9 Row: d Column: 18
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 68798812.
FEATURES Location/Qualifiers
source 1..1936
/db_xref="H-InvDB:HIT000032143"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:4417 IMAGE:2958005"
/tissue_type="Kidney, renal cell adenocarcinoma"
/clone_lib="NIH_MGC_14"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1936
/gene="AP2M1"
/gene_synonym="AP50"
/db_xref="GeneID:1173"
/db_xref="HGNC:HGNC:564"
/db_xref="MIM:601024"
CDS 136..1443
/gene="AP2M1"
/gene_synonym="AP50"
/codon_start=1
/product="adaptor-related protein complex 2, mu 1 subunit"
/protein_id="AAH04996.1"
/db_xref="GeneID:1173"
/db_xref="HGNC:HGNC:564"
/db_xref="MIM:601024"
/translation="MIGGLFIYNHKGEVLISRVYRDDIGRNAVDAFRVNVIHARQQVR
SPVTNIARTSFFHVKRSNIWLAAVTKQNVNAAMVFEFLYKMCDVMAAYFGKISEENIK
NNFVLIYELLDEILDFGYPQNSETGALKTFITQQGIKSQHQTKEEQSQITSQVTGQIG
WRREGIKYRRNELFLDVLESVNLLMSPQGQVLSAHVSGRVVMKSYLSGMPECKFGMND
KIVIEKQGKGTADETSKSGKQSIAIDDCTFHQCVRLSKFDSERSISFIPPDGEFELMR
YRTTKDIILPFRVIPLVREVGRTKLEVKVVIKSNFKPSLLAQKIEVRIPTPLNTSGVQ
VICMKGKAKYKASENAIVWKIKRMAGMKESQISAEIELLPTNDKKKWARPPISMNFEV
PFAPSGLKVRYLKVFEPKLNYSDHDVIKWVRYIGRSGIYETRC"
BASE COUNT 470 a 527 c 538 g 401 t
ORIGIN
1 ccgaggcagc gggcagacga gcagggggcg ggcggacatc ttgggatccg gagagtggcc
61 gggccggcag agcagggggc cgaggacacc aggtctgttc tcagagcgat gggccgcgga
121 gactgatctg ccgccatgat tggaggctta ttcatctata atcacaaggg ggaggtgctc
181 atctcccgag tctaccgaga tgacatcggg aggaacgcag tggatgcctt tcgggtcaat
241 gttatccatg cccggcagca ggtgcgcagc cccgtcacca acattgctcg caccagcttc
301 ttccacgtta agcggtccaa catttggctg gcagcagtca ccaagcagaa tgtcaacgct
361 gccatggtct tcgaattcct ctataagatg tgtgacgtga tggctgccta ctttggcaag
421 atcagcgagg aaaacatcaa gaacaatttt gtgctcatat atgagctgct ggatgagatt
481 ctagactttg gctacccaca gaattccgag acaggcgcgc tgaaaacctt catcacgcag
541 cagggcatca agagtcagca tcagacaaaa gaagagcagt cacagatcac cagccaggta
601 actgggcaga ttggctggcg gcgagagggt atcaagtatc gtcggaatga gctcttcctg
661 gatgtgctgg agagtgtgaa cctgctcatg tccccacaag ggcaggtgct gagtgcccat
721 gtgtcgggcc gggtggtgat gaagagctac ctgagtggca tgcctgaatg caagtttggg
781 atgaatgaca agattgttat tgaaaagcag ggcaaaggca cagctgatga aacaagcaag
841 agcgggaagc aatcaattgc cattgatgac tgcaccttcc accagtgtgt gcgactcagc
901 aagtttgact ctgaacgcag catcagcttt atcccgccag atggagagtt tgagcttatg
961 aggtatcgca caaccaagga catcatcctt cccttccggg tgatcccgct agtgcgagaa
1021 gtgggacgca ccaaactgga ggtcaaggtg gtcatcaagt ccaactttaa accctcactg
1081 ctggctcaga agatcgaggt gaggatccca accccactga acacaagcgg ggtgcaggtg
1141 atctgcatga aggggaaggc caagtacaag gccagcgaga atgccatcgt gtggaagatc
1201 aagcgcatgg caggcatgaa ggaatcgcag atcagcgcag agattgagct tctgcctacc
1261 aacgacaaga agaaatgggc tcgacccccc atttccatga actttgaggt gccattcgcg
1321 ccctctggcc tcaaggtgcg ctacttgaag gtgtttgaac cgaagctgaa ctacagcgac
1381 catgatgtca tcaaatgggt gcgctacatt ggccgcagtg gcatttatga aactcgctgc
1441 tagctgccac taggcagcta gcccacctcc ccagccaccc tcctccacag gtccaggtgc
1501 cgctccctcc cccaccacac atcagtgtct cctccctcct gctttgctgc cttccctttg
1561 caccagcccg agtctaggtc tgggccaagc acattacaag tgggaccggt ggagcagccc
1621 ctgggctccc tgggcagggg agttctgagg ctcctgctct cccatccacc tgtctgtcct
1681 ggcctaatgc caggctctga gttctgtgac caaagccagg tgggttccct ttccttccca
1741 cccctgtggc cacagctctg gagtgggagg gttggttgcc cctcacctca gagctccccc
1801 aaaggccagt aatggatccc cggcctcagt ccctactctg ctttgggata gtgtgagctt
1861 cattttgtac acgtgtgact tcgtccagtt acaaacccaa taaactctgt agagtggaaa
1921 aaaaaaaaaa aaaaaa
//