LOCUS BC004983 1566 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha, mRNA (cDNA clone MGC:3942 IMAGE:2957970), complete cds. ACCESSION BC004983 VERSION BC004983.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1566) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1566) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (21-MAR-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: DCTD/DTP cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 9 Row: n Column: 14 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 10092618. FEATURES Location/Qualifiers source 1..1566 /db_xref="H-InvDB:HIT000032132" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:3942 IMAGE:2957970" /tissue_type="Kidney, renal cell adenocarcinoma" /clone_lib="NIH_MGC_14" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..1566 /gene="NFKBIA" /gene_synonym="IKBA" /gene_synonym="MAD-3" /db_xref="GeneID:4792" /db_xref="HGNC:HGNC:7797" /db_xref="MIM:164008" CDS 94..1047 /gene="NFKBIA" /gene_synonym="IKBA" /gene_synonym="MAD-3" /codon_start=1 /product="nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha" /protein_id="AAH04983.1" /db_xref="GeneID:4792" /db_xref="HGNC:HGNC:7797" /db_xref="MIM:164008" /translation="MFQAAERPQEWAMEGPRDGLKKERLLDDRHDSGLDSMKDEEYEQ MVKELQEIRLEPQEVPRGSEPWKQQLTEDGDSFLHLAIIHEEKALTMEVIRQVKGDLA FLNFQNNLQQTPLHLAVITNQPEIAEALLGAGCDPELRDFRGNTPLHLACEQGCLASV GVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGR TALHLAVDLQNPDLVSLLLKCGADVNRVTYQGYSPYQLTWGRPSTRIQQQLGQLTLEN LQMLPESEDEESYDTESEFTEFTEDELPYDDCVFGGQRLTL" BASE COUNT 398 a 404 c 415 g 349 t ORIGIN 1 gccgccgtcc cgcccgccag cgccccagcg aggaagcagc gcgcagcccg cggcccagcg 61 cacccgcagc agcgcccgca gctcgtccgc gccatgttcc aggcggccga gcgcccccag 121 gagtgggcca tggagggccc ccgcgacggg ctgaagaagg agcggctact ggacgaccgc 181 cacgacagcg gcctggactc catgaaagac gaggagtacg agcagatggt caaggagctg 241 caggagatcc gcctcgagcc gcaggaggtg ccgcgcggct cggagccctg gaagcagcag 301 ctcaccgagg acggggactc gttcctgcac ttggccatca tccatgaaga aaaggcactg 361 accatggaag tgatccgcca ggtgaaggga gacctggctt tcctcaactt ccagaacaac 421 ctgcagcaga ctccactcca cttggctgtg atcaccaacc agccagaaat tgctgaggca 481 cttctgggag ctggctgtga tcctgagctc cgagactttc gaggaaatac ccccctacac 541 cttgcctgtg agcagggctg cctggccagc gtgggagtcc tgactcagtc ctgcaccacc 601 ccgcacctcc actccatcct gaaggctacc aactacaatg gccacacgtg tctacactta 661 gcctctatcc atggctacct gggcatcgtg gagcttttgg tgtccttggg tgctgatgtc 721 aatgctcagg agccctgtaa tggccggact gcccttcacc tcgcagtgga cctgcaaaat 781 cctgacctgg tgtcactcct gttgaagtgt ggggctgatg tcaacagagt tacctaccag 841 ggctattctc cctaccagct cacctggggc cgcccaagca cccggataca gcagcagctg 901 ggccagctga cactagaaaa ccttcagatg ctgccagaga gtgaggatga ggagagctat 961 gacacagagt cagagttcac ggagttcaca gaggacgagc tgccctatga tgactgtgtg 1021 tttggaggcc agcgtctgac gttatgagcg caaaggggct gaaagaacat ggacttgtat 1081 atttgtacaa aaaaaaagtt ttatttttct aaaaaaagaa aaaagaagaa aaaatttaaa 1141 gggtgtactt atatccacac tgcacactgc ctggcccaaa acgtcttatt gtggtaggat 1201 cagccctcat tttgttgctt ttgtgaactt tttgtagggg acgagaaaga tcattgaaat 1261 tctgagaaaa cttcttttaa acctcacctt tgtggggttt ttggagaagg ttatcaaaaa 1321 tttcatggaa ggaccacatt ttatatttat tgtgcttcga gtgactgacc ccagtggtat 1381 cctgtgacat gtaacagcca ggagtgttaa gcgttcagtg atgtggggtg aaaagttact 1441 acctgtcaag gtttgtgtta ccctcctgta aatggtgtac ataatgtatt gttggtaatt 1501 attttggtac ttttatgatg tatatttatt aaacagattt ttacaaaaaa aaaaaaaaaa 1561 aaaaaa //