LOCUS BC004909 1854 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens aldehyde dehydrogenase 6 family, member A1, mRNA (cDNA
clone MGC:4657 IMAGE:3530715), complete cds.
ACCESSION BC004909
VERSION BC004909.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1854)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1854)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (21-MAR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 11 Row: i Column: 21
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 25777737.
FEATURES Location/Qualifiers
source 1..1854
/db_xref="H-InvDB:HIT000032076"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:4657 IMAGE:3530715"
/tissue_type="Muscle, rhabdomyosarcoma"
/clone_lib="NIH_MGC_17"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1854
/gene="ALDH6A1"
/gene_synonym="MGC40271"
/gene_synonym="MMSADHA"
/db_xref="GeneID:4329"
/db_xref="HGNC:HGNC:7179"
/db_xref="MIM:603178"
CDS 32..1639
/gene="ALDH6A1"
/gene_synonym="MGC40271"
/gene_synonym="MMSADHA"
/codon_start=1
/product="aldehyde dehydrogenase 6 family, member A1"
/protein_id="AAH04909.1"
/db_xref="GeneID:4329"
/db_xref="HGNC:HGNC:7179"
/db_xref="MIM:603178"
/translation="MAALLAAAAVRARILQVSSKVKSSPTWYSASSFSSSVPTVKLFI
GGKFVESKSDKWIDIHNPATNEVIGRVPQATKAEMDAAIASCKRAFPAWADTSVLSRQ
QVLLRYQQLIKENLKEIAKLITLEQGKTLADAEGDVFRGLQVVEHACSVTSLMMGETM
PSITKDMDLYSYRLPLGVCAGIAPFNFPAMIPLWMFPMAMVCGNTFLMKPSERVPGAT
MLLAKLLQDSGAPDGTLNIIHGQHEAVNFICDHPDIKAISFVGSNKAGEYIFERGSRH
GKRVQANMGAKNHGVVMPDANKENTLNQLVGAAFGAAGQRCMALSTAVLVGEAKKWLP
ELVEHAKNLRVNAGDQPGADLGPLITPQAKERVCNLIDSGTKEGASILLDGRKIKVKG
YENGNFVGPTIISNVKPNMTCYKEEIFGPVLVVLETETLDEAIQIVNNNPYGNGTAIF
TTNGATARKYAHLVDVGQVGVNVPIPVPLPMFSFTGSRSSFRGDTNFYGKQGIQFYTQ
LKTITSQWKEEDATLSSPAVVMPTMGR"
BASE COUNT 513 a 438 c 442 g 461 t
ORIGIN
1 gcggggtgcg gagctagggc ggccgagagc catggcggcg ctattggcgg cggcggcagt
61 gcgagcccgg atcctgcagg tttcttccaa ggtgaaatcc agtcccacct ggtattcagc
121 atcttccttc tcttcttcag tgccaactgt aaagctcttc attggtggga aattcgttga
181 atccaaaagt gacaaatgga tcgatatcca caacccagcc accaatgagg tcattggtcg
241 ggtccctcag gccaccaagg cagaaatgga tgcagccatt gcttcctgca aacgtgcttt
301 tcctgcatgg gcagacactt cagtattaag ccgccagcag gtcttgctcc gctatcaaca
361 acttattaaa gaaaacttga aagaaattgc caagttaatc acattggaac aagggaagac
421 cctagctgat gctgaaggag atgtatttcg aggccttcag gtggttgagc atgcctgtag
481 tgtgacatcc ctcatgatgg gagagaccat gccatccatc accaaagaca tggaccttta
541 ttcctaccgt ctgcctctgg gagtgtgtgc aggcattgct ccattcaatt ttcctgccat
601 gatccccctt tggatgtttc ccatggccat ggtgtgtgga aataccttcc taatgaaacc
661 atctgagcga gtccctggag caactatgct tcttgctaag ttgctccagg attctggtgc
721 ccctgatgga acattaaaca tcatccatgg acagcatgaa gctgtaaatt ttatttgcga
781 tcatccggac atcaaagcaa tcagctttgt gggatccaac aaggcaggag agtatatctt
841 cgagagagga tcaagacatg gcaagagggt tcaagccaat atgggagcca agaaccatgg
901 ggtagtcatg ccagatgcca ataaggaaaa taccctgaac cagctggttg gggcagcatt
961 tggagctgct ggtcagcgct gcatggctct ttcaacagca gtccttgtgg gagaagccaa
1021 gaagtggctg ccagagctgg tggagcatgc caaaaacctg agagtcaatg caggagatca
1081 gcctggagct gatcttggcc ctctgatcac tccccaggcc aaagagcgag tctgtaatct
1141 gattgatagt ggaacaaagg agggagcttc catccttctt gatggacgaa aaattaaagt
1201 gaaaggctat gaaaatggca actttgttgg accaaccatc atctcgaatg tcaagccaaa
1261 tatgacctgt tacaaagagg agatttttgg tccagttctt gtggttctgg agacagaaac
1321 attggatgaa gccatccaga ttgtaaataa caacccatat ggaaatggaa ctgccatctt
1381 caccaccaat ggagccactg ctcggaaata tgcccacttg gtggatgttg gacaggtggg
1441 agtgaatgtc cccattccag tgcctttgcc aatgttctca ttcaccggct ctcgatcctc
1501 cttcagggga gacaccaatt tctatggcaa acagggcatc caattctaca ctcagttaaa
1561 gaccattact tctcagtgga aagaagaaga tgctactctt tcctcacctg ctgttgtcat
1621 gcctaccatg ggccgttaga aacaagtttg tttaagactg actccatcct gagtaatctc
1681 cctttatttt tgaccagctt catttgtcag ctttgctcag atcagatcga tgggattgga
1741 atacattgta actaaaatct tcctcaggac tattaacccc tgcaaagttt ctacagggaa
1801 ctgcctagtg taacaatgaa accagatttc tcaaaaaaaa aaaaaaaaaa aaaa
//