LOCUS BC004901 1807 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens fatty acid desaturase 3, mRNA (cDNA clone MGC:4158
IMAGE:3532219), complete cds.
ACCESSION BC004901
VERSION BC004901.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1807)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1807)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (21-MAR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC004901.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 11 Row: b Column: 11
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 34304362.
FEATURES Location/Qualifiers
source 1..1807
/db_xref="H-InvDB:HIT000032069"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:4158 IMAGE:3532219"
/tissue_type="Muscle, rhabdomyosarcoma"
/clone_lib="NIH_MGC_17"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1807
/gene="FADS3"
/gene_synonym="CYB5RP"
/db_xref="GeneID:3995"
/db_xref="HGNC:HGNC:3576"
/db_xref="MIM:606150"
CDS 154..1491
/gene="FADS3"
/gene_synonym="CYB5RP"
/codon_start=1
/product="fatty acid desaturase 3"
/protein_id="AAH04901.1"
/db_xref="GeneID:3995"
/db_xref="HGNC:HGNC:3576"
/db_xref="MIM:606150"
/translation="MGGVGEPGPREGPAQPGAPLPTFCWEQIRAHDQPGDKWLVIERR
VYDISRWAQRHPGGSRLIGHHGAEDATDAFRAFHQDLNFVRKFLQPLLIGELAPEEPS
QDGPLNAQLVEDFRALHQAAEDMKLFDASPTFFAFLLGHILAMEVLAWLLIYLLGPGW
VPSALAAFILAISQAQSWCLQHDLGHASIFKKSWWNHVAQKFVMGQLKGFSAHWWNFR
HFQHHAKPNIFHKDPDVTVAPVFLLGESSVEYGKKKRRYLPYNQQHLYFFLIGPPLLT
LVNFEVENLAYMLVCMQWADLLWAASFYARFFLSYLPFYGVPGVLLFFVAVRVLESHW
FVWITQMNHIPKEIGHEKHRDWVSSQLAATCNVEPSLFTNWFSGHLNFQIEHHLFPRM
PRHNYSRVAPLVKSLCAKHGLSYEVKPFLTALVDIVRSLKKSGDIWLDAYLHQ"
BASE COUNT 349 a 590 c 523 g 345 t
ORIGIN
1 cgcacgctcg ctcgtacggc ggccgcggcg gcagggcggg gccggagcag cgggcggcgg
61 cggaggcggc gcccgggagc gctcttcgct tccctcgggg tcttgctcgg acctcggcca
121 ccgcctggga tccccaggac tcgtgcgtgc agcatgggcg gcgtcgggga gccgggaccg
181 cgggagggac ccgcgcagcc gggggcaccg ctgcccacct tctgctggga gcagatccgc
241 gcgcacgacc agcccggcga caagtggctg gtcatcgagc gccgcgtcta cgacatcagc
301 cgctgggcac agcggcaccc agggggcagc cgcctcatcg gccaccacgg cgctgaggac
361 gccacggatg ccttccgtgc cttccatcaa gatctcaatt ttgtgcgcaa gttcctacag
421 cccctgttga ttggagagct ggctccggaa gaacccagcc aggatggacc cctgaatgcg
481 cagctggtcg aggacttccg agccctgcac caggcagccg aggacatgaa gctgtttgat
541 gccagtccca ccttctttgc tttcctactg ggccacatcc tggccatgga ggtgctggcc
601 tggctcctta tctacctcct gggtcctggc tgggtgccca gtgccctggc cgccttcatc
661 ctggccatct ctcaggctca gtcctggtgt ctgcagcatg acctgggcca tgcctccatc
721 ttcaagaagt cctggtggaa ccacgtggcc cagaagttcg tgatggggca gctaaagggc
781 ttctccgccc actggtggaa cttccgccac ttccagcacc acgccaagcc caacatcttc
841 cacaaagacc cagacgtgac ggtggcgccc gtcttcctcc tgggggagtc atccgtcgag
901 tatggcaaga agaaacgcag atacctaccc tacaaccagc agcacctgta cttcttcctg
961 atcggcccgc cgctgctcac cctggtgaac tttgaagtgg aaaatctggc gtacatgctg
1021 gtgtgcatgc agtgggcgga tttgctctgg gccgccagct tctatgcccg cttcttctta
1081 tcctacctcc ccttctacgg cgtccctggg gtgctgctct tctttgttgc tgtcagggtc
1141 ctggaaagcc actggttcgt gtggatcaca cagatgaacc acatccccaa ggagatcggc
1201 cacgagaagc accgggactg ggtcagctct cagctggcag ccacctgcaa cgtggagccc
1261 tcacttttca ccaactggtt cagcgggcac ctcaacttcc agatcgagca ccacctcttc
1321 cccaggatgc cgagacacaa ctacagccgg gtggccccgc tggtcaagtc gctgtgtgcc
1381 aagcacggcc tcagctacga agtgaagccc ttcctcaccg cgctggtgga catcgtcagg
1441 tccctgaaga agtctggtga catctggctg gacgcctacc tccatcagtg aaggcaacac
1501 ccaggcgggc agagaagggc tcagggcacc agcaaccaag ccagcccccg gcgggatcga
1561 tacccccacc cctccactgg ccagcctggg ggtgccctgc ctgccctcct ggtactgttg
1621 tcttcccctc ggccccctca catgtgtatt cagcagccct atggccttgg ctctgggcct
1681 gatgggacag gggtagaggg aaggtgagca tagcacattt tcctagagcg agaattgggg
1741 gaaagctgtt atttttatat taaaatacat tcagatgtaa aaaaaaaaaa aaaaaaaaaa
1801 aaaaaaa
//