LOCUS BC004896 1086 bp mRNA linear HUM 03-NOV-2008
DEFINITION Homo sapiens mitochondrial ribosomal protein L39, mRNA (cDNA clone
IMAGE:3529006), partial cds.
ACCESSION BC004896
VERSION BC004896.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1086)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1086)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (21-MAR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Oct 28, 2003 this sequence version replaced BC004896.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 11 Row: g Column: 13.
FEATURES Location/Qualifiers
source 1..1086
/db_xref="H-InvDB:HIT000032065"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3529006"
/tissue_type="Muscle, rhabdomyosarcoma"
/clone_lib="NIH_MGC_17"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene <1..1086
/gene="MRPL39"
/gene_synonym="C21orf92"
/gene_synonym="L39mt"
/gene_synonym="MRP-L5"
/gene_synonym="MRPL5"
/gene_synonym="MSTP003"
/gene_synonym="PRED22"
/gene_synonym="PRED66"
/gene_synonym="RPML5"
/db_xref="GeneID:54148"
/db_xref="HGNC:HGNC:14027"
/db_xref="MIM:611845"
CDS <1..1004
/gene="MRPL39"
/gene_synonym="C21orf92"
/gene_synonym="L39mt"
/gene_synonym="MRP-L5"
/gene_synonym="MRPL5"
/gene_synonym="MSTP003"
/gene_synonym="PRED22"
/gene_synonym="PRED66"
/gene_synonym="RPML5"
/codon_start=3
/product="MRPL39 protein"
/protein_id="AAH04896.2"
/db_xref="GeneID:54148"
/db_xref="HGNC:HGNC:14027"
/db_xref="MIM:611845"
/translation="MGSRALRLWLVAPGGGIKWRFIATSPASQLSPTELTEMRNDLFN
KEKARQLSLTPRTEKIEVKHVGKTDPGTVFVMNKNISTPYSCAMHLSEWYCRKSILAL
VDGQPWDMYKPLTKSCEIKFLTFKDCDPGEVNKAYWRSCAMMMGCVIERAFKDEYMVN
LVRAPEVPVISGAFCYDVVLDSKLDEWMPTKENLRSFTKDAHALIYKDLPFETLEVEA
KVALEIFQHSKYKVDFIEEKASQNPERIVKLHRIGDFIDVSEGPLIPRTSICFQYEVS
AVHNLQPTQPSLIRRFQGVSLPVHLRAHFTIWDKLLERSRKMVTEDQSKATEECTST"
BASE COUNT 366 a 194 c 235 g 291 t
ORIGIN
1 ccatgggttc ccgggcgctg cggctctggc tggtcgcacc cggtggcggg atcaaatgga
61 gatttatagc aacatcgcca gcttctcagc tgtcaccgac agaattgaca gaaatgcgga
121 atgatctctt taataaagag aaagccaggc agttatcatt aactccccga actgagaaga
181 tagaagttaa gcatgttggg aaaactgacc ccggtactgt cttcgtgatg aataaaaaca
241 tttcaactcc ctacagttgt gccatgcatt taagcgagtg gtattgcagg aagtccattc
301 tggctctggt ggatggacag ccttgggaca tgtataagcc tttaacaaag tcctgtgaaa
361 ttaaatttct tactttcaaa gattgtgatc caggagaagt gaataaggca tattggcgtt
421 cctgtgctat gatgatgggc tgtgtgatag agagggcatt caaagatgaa tatatggtca
481 atttggtcag agctccagaa gttcctgtaa tttctggtgc cttctgttat gacgtagttt
541 tggatagcaa acttgatgag tggatgccaa caaaagagaa cttacgttcc ttcacaaagg
601 atgctcatgc tttaatttat aaagatcttc catttgaaac tctggaagtt gaagcaaaag
661 tggcattgga aatatttcaa cacagcaagt acaaagtaga tttcatagaa gagaaggcat
721 ctcagaaccc tgagagaata gtcaagctac acagaatagg tgacttcatt gatgtgagtg
781 agggccctct tattccaaga acaagtattt gtttccagta tgaagtgtca gcagttcaca
841 atcttcaacc cacccagcca agtctcatac gaagattcca gggtgtgtct ttacctgttc
901 acttaagagc acattttaca atatgggata agctattgga aagatctcgg aaaatggtaa
961 ctgaagatca aagtaaagca acagaggaat gtacatctac ctaataactt tctaaaattt
1021 aaatatgtat aataaaataa atgttttaaa tataaaaaca aaaaaaaaaa aaaaaaaaaa
1081 aaaaaa
//