LOCUS BC004856 1370 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens frequenin homolog (Drosophila), mRNA (cDNA clone
MGC:10261 IMAGE:3928335), complete cds.
ACCESSION BC004856
VERSION BC004856.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1370)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1370)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (21-MAR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC004856.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 14 Row: l Column: 10
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 17738307.
FEATURES Location/Qualifiers
source 1..1370
/db_xref="H-InvDB:HIT000032036"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:10261 IMAGE:3928335"
/tissue_type="Ovary, adenocarcinoma"
/clone_lib="NIH_MGC_9"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1370
/gene="FREQ"
/gene_synonym="DKFZp761L1223"
/gene_synonym="FLUP"
/gene_synonym="NCS-1"
/gene_synonym="NCS1"
/db_xref="GeneID:23413"
/db_xref="HGNC:HGNC:3953"
/db_xref="MIM:603315"
CDS 87..659
/gene="FREQ"
/gene_synonym="DKFZp761L1223"
/gene_synonym="FLUP"
/gene_synonym="NCS-1"
/gene_synonym="NCS1"
/codon_start=1
/product="frequenin homolog (Drosophila)"
/protein_id="AAH04856.1"
/db_xref="GeneID:23413"
/db_xref="HGNC:HGNC:3953"
/db_xref="MIM:603315"
/translation="MGKSNSKLKPEVVEELTRKTYFTEKEVQQWYKGFIKDCPSGQLD
AAGFQKIYKQFFPFGDPTKFATFVFNVFDENKDGRIEFSEFIQALSVTSRGTLDEKLR
WAFKLYDLDNDGYITRNEMLDIVDAIYQMVGNTVELPEEENTPEKRVDRIFAMMDKNA
DGKLTLQEFQEGSKADPSIVQALSLYDGLV"
BASE COUNT 326 a 375 c 371 g 298 t
ORIGIN
1 ccggcccggc ccgcccggcc cagccgctcc tgctgggcgc cccaaccggg tccggcccgg
61 gggggcgggg gccgcggccg ccgaggatgg ggaaatccaa cagcaagttg aagcccgaag
121 ttgtggagga gctgaccagg aagacctact ttaccgagaa ggaggtccag cagtggtaca
181 aaggcttcat caaggactgc cccagtgggc agctggatgc ggcaggcttc cagaagatct
241 acaagcaatt cttcccgttc ggagacccca ccaagtttgc cacatttgtt ttcaacgtct
301 ttgatgaaaa caaggacggg cgaattgagt tctccgagtt catccaggcg ctgtcggtga
361 cctcacgggg aaccctggat gagaagctac ggtgggcctt caagctctac gacttggaca
421 atgatggcta catcaccagg aatgagatgc tggacattgt ggatgccatt taccagatgg
481 tggggaatac cgtggagctc ccagaggagg agaacactcc tgagaagagg gtggaccgga
541 tctttgccat gatggataag aatgccgacg ggaagctgac cctgcaggag ttccaggagg
601 ggtccaaggc agacccgtcc attgtgcagg cgctgtccct ctacgacggg ctggtatagt
661 cccaggctgg agctggatgc ctgggaacca ctcacctcct tctgtgccat gaggccacct
721 cagccctgac accaaccccg tgcgtccacc cagccttctt ccgcatccac acacagccgg
781 ctgcccttga cccgggaggc cccggctctc ctctcccctg tcctgcaccc atcccccgcc
841 tgaagccacc ggctccaatt gccagcaacc tctgcttgtc cggaaaacga caacacgaaa
901 tggaaaaggc tacagccctc tgcataaacc aaggacttgg ctgcctcgca ggcagcctcc
961 gttcctcccg ctctcttgcg cgtgtgcttt tttttttatt ttgaacagac gttttaaaag
1021 aaaaaaaaaa caactacctt ctgtcctaga agacacagac tgacagatgg ggtgaaggcc
1081 tggggacctc agagaactct gccttgccct cgtccctcgt ccttcggcag ccggagaggc
1141 tgtgggtggg ccgagggtgt ctaggggttc tgcctagtca acgttatttg tcgtcccatc
1201 ttttggcagc aaaaccacct gcgtggctag gatgattaat tatgaggatg atgatttttt
1261 ttgtgataac agtattgtgc tttttgtggg gaaagtgagg tttttttttt atatacatat
1321 ataattgata tctttaattt aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
//