LOCUS BC004537 1077 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens ATPase, H+ transporting, lysosomal 16kDa, V0 subunit
c, mRNA (cDNA clone MGC:3723 IMAGE:3618755), complete cds.
ACCESSION BC004537
VERSION BC004537.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1077)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1077)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (14-MAR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 20, 2003 this sequence version replaced BC004537.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 12 Row: h Column: 17.
FEATURES Location/Qualifiers
source 1..1077
/db_xref="H-InvDB:HIT000032011"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:3723 IMAGE:3618755"
/tissue_type="Skin, melanotic melanoma."
/clone_lib="NIH_MGC_20"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1077
/gene="ATP6V0C"
/gene_synonym="VATL"
/gene_synonym="Vma3"
/db_xref="GeneID:527"
/db_xref="HGNC:HGNC:855"
/db_xref="MIM:108745"
CDS 119..586
/gene="ATP6V0C"
/gene_synonym="VATL"
/gene_synonym="Vma3"
/codon_start=1
/product="ATPase, H+ transporting, lysosomal 16kDa, V0
subunit c"
/protein_id="AAH04537.1"
/db_xref="GeneID:527"
/db_xref="HGNC:HGNC:855"
/db_xref="MIM:108745"
/translation="MSESKSGPEYASFFAVMGASAAMVFSALGAAYGTAKSGTGIAAM
SVMRPEQIMKSIIPVVMAGIIAIYGLVVAVLIANSLNDDISLYKSFLQLGAGLSVGLS
GLAAGFAIGIVGDAGVRGTAQQPRLFVGMILILIFAEVLGLYGLIVALILSTK"
BASE COUNT 181 a 385 c 283 g 228 t
ORIGIN
1 gacgggccgg atcgccttcg ccgccgcccg cccgcaaacc ttcgtgcccg gcccgtcctc
61 gcccccgcct ccgccaccgc ctcggcccgc agagcttgcc ccctccccac ccgcagacat
121 gtccgagtcc aagagcggcc ccgagtatgc ttcgtttttc gccgtcatgg gcgcctcggc
181 cgccatggtc ttcagcgccc tgggcgctgc ctatggcaca gccaagagcg gtaccggcat
241 tgcggccatg tctgtcatgc ggccggagca gatcatgaag tccatcatcc cagtggtcat
301 ggctggcatc atcgccatct acggcctggt ggtggcagtc ctcatcgcca actccctgaa
361 tgacgacatc agcctctaca agagcttcct ccagctgggc gccggcctga gcgtgggcct
421 gagcggcctg gcagccggct ttgccatcgg catcgtgggg gacgctggcg tgcggggcac
481 cgcccagcag ccccgactat tcgtgggcat gatcctgatt ctcatcttcg ccgaggtgct
541 cggcctctac ggtctcatcg tcgccctcat cctctccaca aagtagaccc tctccgagcc
601 caccagccac agaatattat gtaaagacca cccctcctca ttccagaacg aacagcctga
661 cacatacgca cggggccgcc gcccccagta gttggtcttg tacatgcgca gtgtcctagt
721 gcccatcgtc tgtttccccg gccttgcccc cgcccgcccc gtgccgtgga catctgggcc
781 cactcatcgc ccctccaggc ccccggcgcc ccacccccta gagtgctctg tgtatgcgga
841 tgatttagaa ttgtcatttc tctttactgg atgtttattt ataaagatct ggcctgttcc
901 tgcgtctgcg gagcggccct tgtctcccag ctatctataa ccttagctag agtgtcgcct
961 tgtgggttcc tgttgctgag acttcctgga tggagccgcc ctcaccgccg ggcccgtggc
1021 cctgcgcgga gctgtgtcca ataaagttct tggatgtgaa aaaaaaaaaa aaaaaaa
//