LOCUS BC004522 891 bp mRNA linear HUM 02-MAR-2004
DEFINITION Homo sapiens RAB, member RAS oncogene family-like 5, mRNA (cDNA
clone MGC:11238 IMAGE:3939191), complete cds.
ACCESSION BC004522
VERSION BC004522.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 891)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 891)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (12-MAR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC004522.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 14 Row: d Column: 24
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 12232462.
FEATURES Location/Qualifiers
source 1..891
/db_xref="H-InvDB:HIT000032000"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:11238 IMAGE:3939191"
/tissue_type="Lung, small cell carcinoma"
/clone_lib="NIH_MGC_7"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..891
/gene="RABL5"
/gene_synonym="DKFZp761N0823"
/gene_synonym="FLJ13225"
/gene_synonym="FLJ14117"
/db_xref="GeneID:64792"
CDS 69..536
/gene="RABL5"
/gene_synonym="DKFZp761N0823"
/gene_synonym="FLJ13225"
/gene_synonym="FLJ14117"
/codon_start=1
/product="RABL5 protein"
/protein_id="AAH04522.1"
/db_xref="GeneID:64792"
/translation="MLKAKILFVGPCESGKTVLANFLTESSDITEYSPTQGVRFESCW
PALMKDAHGVVIVFNADIPSHRKEMEMWYSCFVQQPSLQDTQCMLIAHHKPGSGDDKG
SLSLSPPLNKLKLVHSNLEDDPEEIRMEFIKYLKSIINSMSESRDREEMSIMT"
misc_feature 81..344
/gene="RABL5"
/gene_synonym="DKFZp761N0823"
/gene_synonym="FLJ13225"
/gene_synonym="FLJ14117"
/note="RAB; Region: Rab subfamily of small GTPases"
/db_xref="CDD:smart00175"
BASE COUNT 246 a 229 c 210 g 206 t
ORIGIN
1 caagtagagc tccgtcctga cgcgccgcct cccgtgggct ccggccggct aagccgcggc
61 ggacaactat gctgaaagcc aagatcctct tcgtggggcc ttgcgagagt ggaaaaactg
121 ttttggccaa ctttctgaca gaatcttctg acatcactga atacagccca acccaaggag
181 tgaggtttga gtcctgctgg ccggccctga tgaaggatgc tcatggagtg gtgatcgtct
241 tcaatgctga catcccaagc caccggaagg aaatggagat gtggtattcc tgctttgtcc
301 aacagccgtc cttacaggac acacagtgta tgctaattgc acaccacaaa ccaggctctg
361 gagatgataa aggaagcctg tctttgtcgc cacccttgaa caagctgaag ctggtgcact
421 caaacctgga agatgaccct gaggagatcc ggatggaatt cataaagtat ttaaaaagca
481 taatcaactc catgtctgag agcagagaca gggaggagat gtcaattatg acctagccag
541 ccttcacctg ggactgccac atccccagtg aaatcagcat gtttctcggt gcagatctga
601 aatcacatcc agctcctgat gttttcttct ccctctgact gcagaggaag tgttcctacc
661 tgcaggaagg cacctgtcac gcagggcgtt cactcagacc atctgtgctc tgccctgagt
721 tcagttgaga aaatcctatt atcaaatttg gatttcctgg ccccagaact tcccaaagac
781 ctgtaaaatg gagggattta ccacctcaca tatgtccagt taaacagttt gtggacttgt
841 aaccgtcgca gcccaatgat acaacagtag tttaaaaaaa aaaaaaaaaa a
//