LOCUS BC004506 2743 bp mRNA linear HUM 11-DEC-2003
DEFINITION Homo sapiens chromosome 5 open reading frame 4, mRNA (cDNA clone
IMAGE:3838106), partial cds.
ACCESSION BC004506
VERSION BC004506.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2743)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2743)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (12-MAR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Dec 9, 2003 this sequence version replaced BC004506.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 14 Row: k Column: 4.
FEATURES Location/Qualifiers
source 1..2743
/db_xref="H-InvDB:HIT000086379"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3838106"
/tissue_type="Ovary, adenocarcinoma"
/clone_lib="NIH_MGC_9"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene <1..2743
/gene="C5orf4"
/gene_synonym="FLJ13758"
/db_xref="GeneID:10826"
CDS <1..902
/gene="C5orf4"
/gene_synonym="FLJ13758"
/codon_start=3
/product="C5orf4 protein"
/protein_id="AAH04506.2"
/db_xref="GeneID:10826"
/translation="LLSFVAFWNSVTWHLQRFWGASGYFWQAQWERLLTTFEGKEWIL
FFIGAIQVPCLFFWSFNGLLLVVDTTGKPNFISRYRIQVGKNEPVDPVKLRQSIRTVL
FNQCMISFPMVVFLYPFLKWWRDPCRRELPTFHWFLLELAIFTLIEEVLFYYSHRLLH
HPTFYKKIHKKHHEWTAPIGVISLYAHPIEHAVSNMLPVIVGPLVMGSHLSSITMWFS
LALIITTISHCGYHLPFLPSPEFHDYHHLKFNQCYGVLGVLDHLHGTDTMFKQTKAYE
RHVLLLGFTPLSESIPDSPKRME"
misc_feature 165..758
/gene="C5orf4"
/gene_synonym="FLJ13758"
/note="Sterol_desat; Region: Sterol desaturase. This
family includes C-5 sterol desaturase and C-4 sterol
methyl oxidase. Members of this family are involved in
cholesterol biosynthesis and biosynthesis a plant
cuticular wax. These enzymes contain many conserved
histidine residues. Members of this family are integral
membrane proteins"
/db_xref="CDD:pfam01598"
BASE COUNT 718 a 758 c 603 g 664 t
ORIGIN
1 gacttctctc atttgtggcc ttctggaact cagtgacatg gcatcttcag agattttggg
61 gtgcttctgg ctacttttgg caagcccagt gggagaggct gctgactaca tttgaaggga
121 aggagtggat cctcttcttt ataggtgcca tccaagtgcc ttgtctcttc ttctggagct
181 tcaatgggct tctattggtg gttgacacaa caggaaaacc taacttcatc tctcgctacc
241 gaattcaggt cggcaagaat gaacctgtgg atcctgtgaa actgcgccag tctatccgca
301 cagttctttt caaccagtgc atgatatctt tccccatggt ggtcttcctc tatcccttcc
361 tcaaatggtg gagagacccc tgccgccgtg agctacccac cttccactgg ttcctcctgg
421 agctggccat cttcacgctg atcgaggaag tcttgttcta ctattcacac cggctccttc
481 accacccaac attctacaag aaaatccaca agaaacacca tgagtggaca gctcccattg
541 gcgtgatctc tctctatgcc caccctatag agcatgcagt ctccaacatg ctaccggtga
601 tagtgggccc attagtaatg ggctcccact tgtcctccat caccatgtgg ttttccttgg
661 ccctcatcat caccaccatc tcccactgtg gctaccacct tcccttcctg ccttcgcctg
721 aattccacga ctaccaccat ctcaagttca accagtgcta tggggtgctg ggtgtgctgg
781 accacctcca tgggactgac accatgttca agcagaccaa ggcctacgag agacatgtcc
841 tcctgctggg cttcaccccg ctctctgaga gcatcccaga ctccccaaag aggatggagt
901 gagagacagc ctaagtgtca tcctggctgt ccctcagcca tgggatgcag acacggcttc
961 ctgattgcac ctaacaattt gcctccttcg gccacacgcc ctaatgatgg caccaccagg
1021 gtagagggaa ggtcggcttc ccggaaaagc agggccaagg atgaggcttt cttcaaacta
1081 ctgcccttga tgtccctcaa tgggatcagg agttagctta agaaaaagga aaacacagct
1141 ccccagactg gaggctggtc agagggagga gacccctggt cctctgctgt ggaaggagag
1201 gggttcagcc ccagataact cctttgtggc ctgggcagga tgcagagaat gacaaggctg
1261 aaaggagggg gactggaggc tgcctggctc cagcgagagc tccttctggg accagagggt
1321 gggacggcca ggtatcactt tgccccttcc tgccccaaaa ggctttcaca tacccgactc
1381 aggccagagc caagacaccc tggcaaatca ttataggtct caattcatga cataccagat
1441 gccagtcgcc acttcaccca acacacacac aaacatacac acaccaaaca ctctgagtga
1501 gtggtaaagg ccccgtttta actctggccc accgcaaaca aaaggtttcc ctctgtgggg
1561 gagaaaaaga aatccaggag ctcctccctg gattaaaacc aacgaggtgc agaccaaact
1621 ttaacacctt tagccttatg tggaaaccaa aaaccaactg ctgggaaact gtgaaaagcc
1681 cttttaccca caaggggagg ggtcaaagtt gctgcccttt ggggacaccc gagaccccta
1741 attagcctat ctgaatgagg accaaaggtt agagccctct ttctccccga agaaagagcc
1801 cggaaaaaca tggcagagca aagagcaaaa tcctttctcc cccgaatgct ttaccagttt
1861 ctcagcaaca tttattcaag atgattttta ccaggaacct tatcaaaggc aaaaccacag
1921 ctgcttgggt tgaagtcccc atcctggcct cctctcagcc gccagacatg gccaggaacc
1981 ctgtggttcc caagaacaat ttaaagatca ctctttgatt tgaaagacca ccattatcat
2041 tttactaaat tcttatatat acttgtgcct tttccaactt tcagttctct taagaaaaac
2101 atccactgta gctttataaa ataccttagt atcagctagg tccaagtctc caggcaggac
2161 tatcaaaatg gactccttct tcctatcagc tctagaaccc cagaggactt gcccagtagg
2221 ccagctgagc acttaccagg cagcatctcc ctggccttcc acagtctcgc ctgtctgtct
2281 ctggccttgg tggacctggc tccctcccta ggaggctttt gccctcagct tgaatacagt
2341 tcctggtgca tcaaagctgt aagttctcag ctgctggcct gcactcatca cctcttccta
2401 caaataaaca tttggaaaaa agtccatctt caatatgctt aaagagaagg gtaggagata
2461 aggagaaaga acagatacgg tttttttccc ctttaaggcc tttagatttt gaggtactgt
2521 aaggggccta gaaggacaaa aggctttcat tccctcttcc ttttggcagg caggttatca
2581 gtccttggca gaagggccca gccctatcct tttctgtatc aaacaaaatc cttgaggttg
2641 gtatacaagt taaggctgaa aaaaggcctt aaattcccag taaagaatgt gaaagcaagc
2701 atgtaaaata aactggtctt catgaaaaaa aaaaaaaaaa aaa
//