LOCUS BC004485 966 bp mRNA linear HUM 18-MAR-2009 DEFINITION Homo sapiens PPPDE peptidase domain containing 1, mRNA (cDNA clone MGC:10665 IMAGE:3831754), complete cds. ACCESSION BC004485 VERSION BC004485.2 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 966) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 966) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (12-MAR-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Aug 19, 2003 this sequence version replaced BC004485.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC/DCTD/DTP cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Institute for Systems Biology http://www.systemsbiology.org contact: amadan@systemsbiology.org Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 14 Row: b Column: 9 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 38708308. FEATURES Location/Qualifiers source 1..966 /db_xref="H-InvDB:HIT000031982" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:10665 IMAGE:3831754" /tissue_type="Skin, melanotic melanoma." /clone_lib="NIH_MGC_20" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..966 /gene="PPPDE1" /gene_synonym="CGI-146" /gene_synonym="PNAS-4" /db_xref="GeneID:51029" /db_xref="HGNC:HGNC:24264" CDS 214..798 /gene="PPPDE1" /gene_synonym="CGI-146" /gene_synonym="PNAS-4" /codon_start=1 /product="PPPDE peptidase domain containing 1" /protein_id="AAH04485.1" /db_xref="GeneID:51029" /db_xref="HGNC:HGNC:24264" /translation="MGANQLVVLNVYDMYWMNEYTSSIGIGVFHSGIEVYGREFAYGG HPYPFSGIFEISPGNASELGETFKFKEAVVLGSTDFLEDDIEKIVEELGKEYKGNAYH LMHKNCNHFSSALSEILCGKEIPRWINRLAYFSSCIPFLQSCLPKEWLTPAALQSSVS QELQDELEEAEDAAASASVASTAAGSRPGRHTKL" BASE COUNT 257 a 239 c 248 g 222 t ORIGIN 1 gccaacggtc cggccccgtc cgcacagacg ctcctgtcgg cggcgcccgg gagcggctcg 61 gctgcccgat gcttccgccc cggctgccgc gggccgggct gtacgcttag tgcccggctc 121 aggccccctg aagcgcccgc gggggtgaga gcggcctccg gccccgcgga gacggagcgg 181 cttgaggacg aggcggcggc cgcggggagg aggatggggg ctaaccagtt agtggtgctc 241 aacgtgtacg acatgtattg gatgaacgaa tatacctcat ccattggaat tggagttttt 301 cattcaggaa ttgaagtcta tggcagagaa tttgcttatg gtggccatcc ttaccccttt 361 tctggaatat ttgaaatttc cccaggaaat gcttctgaac taggagaaac atttaaattt 421 aaagaagctg ttgttttagg gagcacggac ttcctagaag atgatataga aaaaattgta 481 gaagaactgg gaaaagaata caaaggcaat gcttatcatt taatgcataa aaactgcaat 541 catttttctt cagctttatc agagattctt tgtgggaaag agattcctcg ctggatcaat 601 cgacttgcct acttcagctc ctgtataccc tttctacaga gttgcctccc gaaggagtgg 661 ctcacgcccg cagccctgca gtctagtgtc agccaagaac tccaggatga actggaggaa 721 gcagaggatg ctgccgcatc cgcttccgtg gcaagcactg cagcaggctc cagacccggg 781 cgccacacta aactataaat gtctccaaag tcacacattc agaactgtct ctggcagtcg 841 aatatcacta gagaaaagta aacagagaag catcctttag atattttgta tgcaaagatg 901 gctctccccc aaatcccagt ttttcagctc aggattatat ttgtaatcaa aaaaaaaaaa 961 aaaaaa //