LOCUS BC004462 2547 bp mRNA linear HUM 19-APR-2005
DEFINITION Homo sapiens family with sequence similarity 60, member A, mRNA
(cDNA clone IMAGE:2820547), complete cds.
ACCESSION BC004462
VERSION BC004462.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2547)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2547)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (12-MAR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 9 Row: o Column: 19
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 10864048
This clone has the following problem: The cds is short compared to
the longest cds in the locus.
FEATURES Location/Qualifiers
source 1..2547
/db_xref="H-InvDB:HIT000031966"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:2820547"
/tissue_type="Lung, small cell carcinoma"
/clone_lib="NIH_MGC_7"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2547
/gene="FAM60A"
/gene_synonym="C12orf14"
/gene_synonym="L4"
/gene_synonym="TERA"
/db_xref="GeneID:58516"
CDS 183..404
/gene="FAM60A"
/gene_synonym="C12orf14"
/gene_synonym="L4"
/gene_synonym="TERA"
/codon_start=1
/product="FAM60A protein"
/protein_id="AAH04462.1"
/db_xref="GeneID:58516"
/translation="MASGSNRTPVFSFLDLTYWKRQKICCGIIYKGRFGEVLIDTHLF
KPCCSNKKAAAEKPEEQGPEPLPISTQEW"
BASE COUNT 725 a 476 c 501 g 845 t
ORIGIN
1 gttgaggagg agggagcgct tgagggggac tggcctggcg tgcactccgc acctcgggga
61 cattattgcg cgtggaacgg ctgcttttgg aagattctga tgctcacagt accacctcaa
121 gtgcctcccc agctcaatct ccttgttaca gtaaccagtc agatgacggc tcagatacag
181 agatggcttc tggttctaac agaacaccag ttttttcctt tttagatctc acttactgga
241 aaagacagaa gatatgttgt gggatcatct ataaaggccg ttttggggaa gtcctcattg
301 acacacatct cttcaagcct tgctgcagca ataagaaagc agctgctgag aagccagagg
361 agcaggggcc agagcctctg cccatctcca ctcaggagtg gtgactgagg tttttatgta
421 gaaggggaac aaaaaaaaaa atatctgaat tttgaaaaac cacaaagcta caaactgacc
481 ctcttttttt ttttgagacg gagttttgct cttgttaccc aggctggagt gcagtggcgt
541 gatcttggct cactgcaact tccgtctccc gggttcaagt gattctcctg cctcagcctc
601 ccaagtagct gggtttatag gtgcccgcca ccagacccgg ctaatttttt agttttagta
661 gagacggggt ttcaccacgt tggccaggct ggtcttaaat gaccctctta tttttaactt
721 ggatacctgc tattctgcca aaagacaatt tctagagtag ttttgaatgg gttgatttcc
781 cccactccca caaactctga agccagtgtc tagcttacta aaaaaagagt tgtatataat
841 atttaagatg ctgagtattt cataggaaag ctgaatgctg ctgtaaagtg ctctttaagt
901 cttttttttt tttaatcccc ttctaatgaa tgaaactagg ggaatttcag gggacagaga
961 tgggatttgt tgtatgataa actgtatgta gtttttagtc tttctgtttt gagaagcagt
1021 ggttggggca tttttaagat ggctggctac tcttgttttc cctcatgata ataaatttgt
1081 cataactcag taacatgaac ttgcccctag aggtagttgt taataatttt gaaatattaa
1141 ggtcttgcca agcttctgat gattcacacc tgtactactg attattaagc aggacagact
1201 gagctttctg ttgcaaatac cttggaggag aaagtaattt ctaaatatac agagaggtaa
1261 cttgactata tatgttgcat cctgtgcctc ccttcatatt aatatttgat aaagatttta
1321 atttatgtaa aacttctaaa gcagaatcaa agctcctctt ggggaaatgg caagtcttta
1381 ggataggcaa gaccctgtat gaatagtacc aaagcattac cgcatggtag agaacacact
1441 cgattaaaaa tgttaagcta tctgaaaaat aaaatgtgca agtcttcagg atggcacaaa
1501 acaaaggtta atgcttcttg gggcacattt cttagagggc ttgctgagtg tgtaaatata
1561 atcgactttt gtttgtgtta catgacttct gtgacttcat tgaaaatctg cacaattcag
1621 tttcagctct ggattacttc agttgacctt tgtgaaggtt tttatctgtg tagaatgggt
1681 gtttgacttg ttttagccta ttaaattttt attttctttc actctgtatt aaaagtaaaa
1741 cttactaaaa gaaaagaggt ttgtgttcac attaaatggt tttggtttgg cttcttttag
1801 tcaggctttc tgaacattga gatatcctga acttagagct cttcaatcct aagattttca
1861 tgaaaagcct ctcacttgaa cccaaaccag agtactctta ctgcctcttt tctaaatgtt
1921 caggaaaagc attgccagtt cagtcttttc aaaatgaggg agaaacattt gcctgccttg
1981 taataacaag actcagtgct tattttttaa actgcatttt aaaaattgga tagtataata
2041 acaataagga gtaagccacc ttttataggc accctgtagt tttatagttc ttaatctaaa
2101 cattttatat ttccttcttt tggaaaaaac ctacatgcta caagccacca tatgcacaga
2161 ctatacagtg agttgagttg gctctcccac agtctttgag gtgaattaca aaagtccagc
2221 cattatcatc ctcctgagtt atttgaaatg attttttttg tacattttgg ctgcagtatt
2281 ggtggtagaa tatactataa tatggatcat ctctacttct gtatttattt atttattact
2341 agacctcaac cacagtcttc tttttcccct tccacctctc tttgcctgta ggatgtactg
2401 tatgtagtca tgcactttgt attaatatat tagaaatcta cagatctgtt ttgtactttt
2461 tatactgttg gatacttata atcaaaactt ttactagggt attgaataaa tctagtctta
2521 ctagaaaata aaaaaaaaaa aaaaaaa
//