LOCUS BC004440 1253 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens ninjurin 1, mRNA (cDNA clone MGC:4033 IMAGE:2820092),
complete cds.
ACCESSION BC004440
VERSION BC004440.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1253)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1253)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (12-MAR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 9 Row: a Column: 15
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 31543289.
FEATURES Location/Qualifiers
source 1..1253
/db_xref="H-InvDB:HIT000031946"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:4033 IMAGE:2820092"
/tissue_type="Lung, small cell carcinoma"
/clone_lib="NIH_MGC_7"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1253
/gene="NINJ1"
/gene_synonym="NIN1"
/gene_synonym="NINJURIN"
/db_xref="GeneID:4814"
/db_xref="HGNC:HGNC:7824"
/db_xref="MIM:602062"
CDS 28..486
/gene="NINJ1"
/gene_synonym="NIN1"
/gene_synonym="NINJURIN"
/codon_start=1
/product="ninjurin 1"
/protein_id="AAH04440.1"
/db_xref="GeneID:4814"
/db_xref="HGNC:HGNC:7824"
/db_xref="MIM:602062"
/translation="MDSGTEEYELNGGLPPGTPGSPDASPARWGWRHGPINVNHYASK
KSAAESMLDIALLMANASQLKAVVEQGPSFAFYVPLVVLISISLVLQIGVGVLLIFLV
KYDLNNPAKHAKLDFLNNLATGLVFIIVVVNIFITAFGVQKPLMDMAPQQ"
BASE COUNT 256 a 433 c 344 g 220 t
ORIGIN
1 gatcctggcg gcctgggcgg ccgcaccatg gactcgggaa ccgaggagta cgagctcaac
61 ggcggcctgc ctccgggcac acccggctcc ccggacgcct cgccggcccg ctggggctgg
121 aggcacgggc ccatcaacgt gaaccattac gccagcaaga agagcgcagc cgagagcatg
181 ctggacatcg cgctgctgat ggccaacgcg tcccagctga aggccgtcgt ggaacagggc
241 cccagcttcg ccttctatgt gcccctggtg gtcctcatct ccatctccct tgtgctgcag
301 atcggcgtgg gggtgctgct catcttcctt gtcaagtacg accttaacaa cccggccaag
361 cacgccaagc tggacttcct caacaacctg gccacgggcc tggtgttcat catcgtggta
421 gtcaacatct tcatcacggc cttcggggtc cagaagccct tgatggacat ggcaccccag
481 cagtaggaca cccaggaccc tggatgctgc ctgccctgca actcagctgc ccgaccccag
541 gagtcgccat acctgtgagg tgtccacctc cctgcacatg gcactaccca gactgccaga
601 gcccaggctg gcctcatctg caccatgtcc cccgaccagc ccttgctctg actgcggcca
661 agcaccacgc aggaggccac tcttgtctct cagcagctgt tcccaggagg cagctccctc
721 ctggcacatg ggggctggcc acaatagccc agagggtcag aactggacag ctgcagagac
781 ctgtgcccag agaagggtct cgacccactc aaggacacac agcaggtccg tggatgggct
841 ggatgagtga ccagggccag cctctgtctc aggacattcc agaaggacaa ggagatgtct
901 ctccctctcc caaagcacca gcgtccctgc ctcccgtggg ccctgtccgg gttgccctgg
961 tgaccccagc ctctgtccac ttcctaaccc agggaccctg cacagccaga actgcctttg
1021 gccctacgga tggccactgg ctctggtctt aagtgcctgg gcttggtggc catcaagagg
1081 gagccagtca ggcctgtgag ggccgtagac cttgtatata ccctgcacca gcagtgaccg
1141 gggagagccc aaccccctcc acgggggtcc cagcacccac ttttctaatc atgaatgaac
1201 aataaagccc acgctctttg tcgggctcca catgccaaaa aaaaaaaaaa aaa
//