LOCUS BC004438 1116 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens processing of precursor 4, ribonuclease P/MRP subunit
(S. cerevisiae), mRNA (cDNA clone MGC:3998 IMAGE:2820501), complete
cds.
ACCESSION BC004438
VERSION BC004438.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1116)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1116)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (12-MAR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 9 Row: c Column: 21
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 5729985.
FEATURES Location/Qualifiers
source 1..1116
/db_xref="H-InvDB:HIT000031944"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:3998 IMAGE:2820501"
/tissue_type="Lung, small cell carcinoma"
/clone_lib="NIH_MGC_7"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1116
/gene="POP4"
/gene_synonym="RPP29"
/db_xref="GeneID:10775"
/db_xref="HGNC:HGNC:30081"
/db_xref="MIM:606114"
CDS 17..679
/gene="POP4"
/gene_synonym="RPP29"
/codon_start=1
/product="processing of precursor 4, ribonuclease P/MRP
subunit (S. cerevisiae)"
/protein_id="AAH04438.1"
/db_xref="GeneID:10775"
/db_xref="HGNC:HGNC:30081"
/db_xref="MIM:606114"
/translation="MKSVIYHALSQKEANDSDVQPSGAQRAEAFVRAFLKRSTPRMSP
QAREDQLQRKAVVLEYFTRHKRKEKKKKAKGLSARQRRELRLFDIKPEQQRYSLFLPL
HELWKQYIRDLCSGLKPDTQPQMIQAKLLKADLHGAIISVTKSKCPSYVGITGILLQE
TKHIFKIITKEDRLKVIPKLNCVFTVETDGFISYIYGSKFQLRSSERSAKKFKAKGTI
DL"
BASE COUNT 336 a 256 c 274 g 250 t
ORIGIN
1 cggaagcggt ccgagaatga agagtgtgat ctaccatgca ttgtctcaga aagaggcgaa
61 tgactccgat gtccagcctt caggagcaca gcgggccgag gccttcgtga gggccttcct
121 gaagcgcagc acgccccgca tgagcccgca ggcccgcgag gaccagctgc agcgcaaggc
181 ggtggtcctg gagtacttca cccgccacaa gcgcaaggag aagaagaaga aagccaaagg
241 cctctctgcc aggcaaagga gggagctgcg gctctttgac attaaaccag agcagcagag
301 atacagcctt ttcctccctc tccatgaact ctggaaacag tacatcaggg acctgtgcag
361 tgggctcaag ccagacacgc agccacagat gattcaggcc aagctcttaa aggcagatct
421 tcacggggct attatttcag tgacaaaatc caaatgcccc tcttatgtgg gtattacagg
481 aatccttcta caggaaacaa agcacatttt caaaattatc accaaagaag accgcctgaa
541 agttatcccc aagctaaact gcgtgttcac tgtggaaacc gatggcttta tttcctacat
601 ttacgggagc aaattccagc ttcggtcaag tgaacggtct gcgaagaagt tcaaagcgaa
661 gggaacaatt gacctgtgaa ttctttgccg tctaaggcag ttgtttatga cagctgaaaa
721 ctggacactc cctaaatgtc cacctttcag tgaagagata gttaagccaa ttccatttat
781 agaccacctc cagccagtga cgctccgagt tgaggatgtt gaacaacatg ggaaggtcgc
841 agcgtactaa gtgaagaagt cagaggacag aggaatttct ctttctagga gattttcatt
901 ttgtgtgact cccatgggga ggaacagact ggcaggaagc acaccggggt taacactggt
961 tgacttgaat aggattattc gatttttaaa aatacttttc catgttttct gagtgctcta
1021 tgataaatca gttgcatctg tgataataca atacatatgt ggacataaac agggatcaaa
1081 taaaggaggt attgctgcaa aaaaaaaaaa aaaaaa
//