LOCUS BC004420 1394 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens toll interacting protein, mRNA (cDNA clone MGC:1194
IMAGE:3356339), complete cds.
ACCESSION BC004420
VERSION BC004420.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1394)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1394)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (12-MAR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 6 Row: o Column: 4
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 21361618.
FEATURES Location/Qualifiers
source 1..1394
/db_xref="H-InvDB:HIT000031927"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:1194 IMAGE:3356339"
/tissue_type="Eye, retinoblastoma"
/clone_lib="NIH_MGC_16"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1394
/gene="TOLLIP"
/gene_synonym="IL-1RAcPIP"
/db_xref="GeneID:54472"
/db_xref="HGNC:HGNC:16476"
/db_xref="MIM:606277"
CDS 125..949
/gene="TOLLIP"
/gene_synonym="IL-1RAcPIP"
/codon_start=1
/product="toll interacting protein"
/protein_id="AAH04420.1"
/db_xref="GeneID:54472"
/db_xref="HGNC:HGNC:16476"
/db_xref="MIM:606277"
/translation="MATTVSTQRGPVYIGELPQDFLRITPTQQQRQVQLDAQAAQQLQ
YGGAVGTVGRLNITVVQAKLAKNYGMTRMDPYCRLRLGYAVYETPTAHNGAKNPRWNK
VIHCTVPPGVDSFYLEIFDERAFSMDDRIAWTHITIPESLRQGKVEDKWYSLSGRQGD
DKEGMINLVMSYALLPAAMVMPPQPVVLMPTVYQQGVGYVPITGMPAVCSPGMVPVAL
PPAAVNAQPRCSEEDLKAIQDMFPNMDQEVIRSVLEAQRGNKDAAINSLLQMGEEP"
BASE COUNT 275 a 442 c 428 g 249 t
ORIGIN
1 gctgactgtg gcggcggcgg cctcgaggtg acaactgtct ccgtcgcagg ctccggcggg
61 ggcgcaggag gtcgcccggc gcgtcactgt cgggtcggcg agccacgggg gccgccgcag
121 caccatggcg accaccgtca gcactcagcg cgggccggtg tacatcggtg agctcccgca
181 ggacttcctc cgcatcacgc ccacacagca gcagcggcag gtccagctgg acgcccaggc
241 ggcccagcag ctgcagtacg gaggcgcagt gggcaccgtg ggccgactga acatcacggt
301 ggtacaggca aagttggcca agaattacgg catgacccgc atggacccct actgccgact
361 gcgcctgggc tacgcggtgt acgagacgcc cacggcacac aatggcgcca agaatccccg
421 ctggaataag gtcatccact gcacggtgcc cccaggcgtg gactctttct atctcgagat
481 cttcgatgag agagccttct ccatggacga ccgcattgcc tggacccaca tcaccatccc
541 agagtccctg aggcagggca aggtggagga caagtggtac agcctgagcg ggaggcaggg
601 ggacgacaag gagggcatga tcaacctcgt catgtcctac gcgctgcttc cagctgccat
661 ggtgatgcca ccccagcccg tggtcctgat gccaacagtg taccagcagg gcgttggcta
721 tgtgcccatc acagggatgc ccgctgtctg tagccccggc atggtgcccg tggccctgcc
781 cccggccgcc gtgaacgccc agccccgctg tagcgaggag gacctgaaag ccatccagga
841 catgttcccc aacatggacc aggaggtgat ccgctccgtg ctggaagccc agcgagggaa
901 caaggatgcc gccatcaact ccctgctgca gatgggggag gagccataga gcctctgcct
961 cgatgccgtt ttgcccccgc tctttggaca cgccgacccg gcgctcccca aggaatgctg
1021 tcccaacaag attcccgtga aagagcaccc gtgtcgcccc ctcccgtgga cttctgtgcc
1081 gccccgtcca cacctgttct tgggtgcatg tgggttttcg gttcctggcg gtccaggacg
1141 gggcgggggc tcccctccca tctcgtgctg ggaggtctca gcgcgctctc ctgtccctgg
1201 gacgtgcgtc tctccttctc atgccgttct ggaaaatgct cttgctgtag agagcagctg
1261 cttctgccag ggtgttggag gtggtggagc gccttccgat tccattcatg gcattttgtg
1321 atgtgatgta attggaatag agctgttgat ttaaggcaca cacaaaaaaa aaaaaaaaaa
1381 aaaaaaaaaa aaaa
//