LOCUS BC004410 2451 bp mRNA linear HUM 08-FEB-2007
DEFINITION Homo sapiens castor zinc finger 1, mRNA (cDNA clone IMAGE:3639341),
partial cds.
ACCESSION BC004410
VERSION BC004410.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2451)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2451)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (12-MAR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 13 Row: j Column: 12.
FEATURES Location/Qualifiers
source 1..2451
/db_xref="H-InvDB:HIT000031923"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3639341"
/tissue_type="Pancreas, adenocarcinoma"
/clone_lib="NIH_MGC_39"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene <1..2451
/gene="CASZ1"
/gene_synonym="cst"
/gene_synonym="dJ734G22.1"
/gene_synonym="RP4-734G22.2"
/gene_synonym="SRG"
/gene_synonym="ZNF693"
/db_xref="GeneID:54897"
/db_xref="HGNC:HGNC:26002"
/db_xref="MIM:609895"
CDS <1..1846
/gene="CASZ1"
/gene_synonym="cst"
/gene_synonym="dJ734G22.1"
/gene_synonym="RP4-734G22.2"
/gene_synonym="SRG"
/gene_synonym="ZNF693"
/codon_start=2
/product="CASZ1 protein"
/protein_id="AAH04410.2"
/db_xref="GeneID:54897"
/db_xref="HGNC:HGNC:26002"
/db_xref="MIM:609895"
/translation="CMQVGCNKVYTSTSDVMTHENFHKKNTQLINDGFQRFRATEDCG
TADCQFYGQKTTHFHCRRPGCTFTFKNKCDIEKHKSYHIKDDAYAKDGFKKFYKYEEC
KYEGCVYSKATNHFHCIRAGCGFTFTSTSQMTSHKRKHERRHIRSSGALGLPPSLLGA
KDTEHEESSNDDLVDFSALSSKNSSLSASPTSQQSSASLAAATAATEAGPSATKPPNS
KISGLLPQGLPGSIPLALALSNSGLPTPTPYFPILAGRGSTSLPVGTPSLLGAVSSGS
AASATPDTPTLVASGAGDSAPVAAASVPAPPASIMERISASKGLISPMMARLAAAALK
PSATFDPGSGQQVTPARFPPAQVKPEPGESTGAPGPHEASQDRSLDLTVKEPSNESNG
HAVPANSSLLSSLMNKMSQGNPGLGSLLNIKAEAEGSPAAEPSPFLGKAVKALVQEKL
AEPWKVYLRRFGTKDFCDGQCDFLHKAHFHCVVEECGALFSTLDGAIKHANFHFRTEG
GAAKGNTEAAFPASAAETKPPMAPSSPPVPPVTTATVSSLEGPAPSPASVPSTPTLLA
WKQLASTIPQMPQIPASVPHLPASPLATTSLENAKPQVKPGFLQFQEK"
BASE COUNT 491 a 855 c 681 g 424 t
ORIGIN
1 ctgcatgcag gtgggctgta acaaggtgta cacgagcacg tctgacgtga tgacccacga
61 gaacttccac aagaagaata cccagctcat taacgacggc ttccagcgct tccgagccac
121 cgaagactgt ggcacagccg actgccagtt ctacggacag aagaccacgc acttccactg
181 caggcgcccc ggctgcacat tcactttcaa gaacaagtgt gacatcgaga agcacaagag
241 ctaccacatc aaggacgatg cctacgccaa ggacggcttc aagaagttct acaagtacga
301 ggagtgcaag tacgagggct gcgtgtacag caaggctacc aaccacttcc actgcatccg
361 cgccggctgc ggcttcacct tcacctccac cagccagatg acctctcaca agcgcaagca
421 tgagcgccgg cacatccgct cctcgggcgc gctggggctg ccgccctcgc tgctgggcgc
481 caaggacacg gagcacgagg agtccagcaa cgacgacctt gttgacttct ccgccctgag
541 cagcaagaac tccagcctga gcgcctcccc taccagccag cagtcctctg cgtccctggc
601 tgccgccact gccgccaccg aggctgggcc cagtgccacc aaacctccca acagcaagat
661 ctcggggctg ctgccccagg gcctgcctgg ctcaatcccc ctggccctgg ccctctccaa
721 ctcgggcctg cccaccccca cgccctactt ccccatactg gctggccgtg ggagcacctc
781 cctgcctgtg ggcaccccca gcctcctggg tgccgtgtcg tctgggtcag cagcctcagc
841 cacccctgac acacccacgc tggtcgcctc gggagctgga gactcagccc ccgtggctgc
901 cgcctctgtc ccggcaccac ccgcctccat catggagagg atctctgcaa gcaagggcct
961 catctcgccc atgatggcca ggctggctgc agctgccctc aagccctctg ccacctttga
1021 cccaggaagc gggcagcagg tcaccccagc caggttcccc ccggcccaag tgaagccgga
1081 acccggtgag agcaccggcg ccccaggccc ccacgaagcc tcccaggacc gcagtctaga
1141 cctgactgtg aaggagccca gcaacgaatc aaatggccac gcagtcccgg caaattcatc
1201 tcttttatcc tcgcttatga ataagatgtc tcagggcaac cctggcctgg gcagcctgct
1261 gaacatcaag gcggaagcgg aggggagccc cgctgcggag ccctcgccct tcctaggcaa
1321 ggccgtgaag gcgctggttc aggagaagtt ggcagagccc tggaaggtgt acctgcgcag
1381 gtttggtaca aaggacttct gtgacggcca gtgtgacttc ctccacaagg cccacttcca
1441 ctgcgtggtg gaggaatgcg gcgcgctctt cagcaccttg gacggggcca tcaagcacgc
1501 aaacttccac ttccggacag agggaggagc agcaaaagga aacacagagg ctgcctttcc
1561 ggcctcggcc gccgagacca aacctcccat ggccccctcg tcccctccgg tccctcctgt
1621 caccacggcc acggtgtcct ctctggaggg gcccgctccc agcccggcct ccgtgccctc
1681 cacccccacc ctgctcgcct ggaagcagct ggcttccacc ataccccaga tgcctcagat
1741 cccagcgtca gtgcctcacc tgcccgcctc gcccttggca acgacttctc tagagaacgc
1801 caagccccag gtcaaacccg gattcctcca gttccaggag aagtgagtcc ctcgatgagc
1861 cgggagtccc gcgttcccct cgcgtctcgg gagtaggtgc tagcaagggc gctaggaggc
1921 cctgttcctc actgcggatg gtgctgctgt ccccagcctc tctggggcat ggccatcggg
1981 tgatgtcctt ctagccaaag atgctgctgc tcctacctca ctgcctgtcc cagagcaggc
2041 cagcccgcgt gggccgatgg tggcggcagt ggctactgct cctgcagggc atgtggtgat
2101 cctgccaggg ccaggtgggg tggactgggc gtggtggtcc tcagaggaca actcccagcc
2161 tgacaaggag ggctgcgtct ccctccgagc ctccgtattg gcctcctctg tggctcacac
2221 ccatggctga atctctgcag ggcacgtgaa gtcacgggta ggggccaggc ccctccaggc
2281 cgtcactggc ctgcacagtg gtctgagctc ttgggtggaa gggaccctcc tcactggatg
2341 gtggtggctc cttgcaggga gaacggtgac tttgtattgt catgtgtgcg gcttcctgtt
2401 ctcaataaaa gtaataaatt ggaaaaaaaa aaaaaaaaaa aaaaaaaaaa a
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