LOCUS BC004398 1419 bp mRNA linear HUM 18-MAR-2009
DEFINITION Homo sapiens HEC1/NDC80 interacting, centrosome associated 1, mRNA
(cDNA clone IMAGE:3636299), partial cds.
ACCESSION BC004398
VERSION BC004398.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1419)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1419)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (12-MAR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 13 Row: j Column: 4.
FEATURES Location/Qualifiers
source 1..1419
/db_xref="H-InvDB:HIT000086355"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3636299"
/tissue_type="Placenta, choriocarcinoma"
/clone_lib="NIH_MGC_21"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene <1..1419
/gene="HICE1"
/gene_synonym="NY-SAR-48"
/db_xref="GeneID:93323"
/db_xref="HGNC:HGNC:30532"
CDS <1..1231
/gene="HICE1"
/gene_synonym="NY-SAR-48"
/codon_start=2
/product="HICE1 protein"
/protein_id="AAH04398.1"
/db_xref="GeneID:93323"
/db_xref="HGNC:HGNC:30532"
/translation="ADSSGRGAGKPATGPTNSSSAKKKDKRVQGGRVIESPYLQYEKK
TTQKAPAGDGSQTRGKMSEGGRKSSLLQKSKADSSGVRKGDLQSTLLEGHGTAPPDLD
LSAINDKSIVKKTPQLAKTISKKPESTSFSAPRKKSPDLSEAMEMMESQTLLLTLLSV
KMENNLAEFERRAEKNLLIMCKEKEKLQKKAHELKRRLLLSQRKRELADVLDAQIEML
SPFEAVATRFKEQYRTFATALDTTRHELPVRSIHLEGDGQQLLDALQHELVTTQRLLG
ELDVGDSEENVQVLDLLSELKDVTAKKDLELRRSFAQVLELSAEASKEAALANQEVWE
ETQGMAPPSRWYFNQDSACRESGGAPKNTPLSEDDNPGASSAPAQATFISPSEDFSSS
SQAEVPPSLSRSGRDLS"
BASE COUNT 436 a 337 c 378 g 268 t
ORIGIN
1 ggcggattcc tcggggcgag gcgctgggaa gcctgcaacc ggccccacaa attctagcag
61 tgccaagaag aaggataaaa gagttcaagg tggaagagtg attgagtccc cgtatctgca
121 gtatgaaaag aagacaaccc aaaaggctcc tgcaggagat gggtcacaga cccgagggaa
181 gatgtctgaa ggtggaagga aatccagcct gctccagaaa agcaaagcag atagcagtgg
241 ggtcagaaag ggtgacctgc agtccacgtt gctggaaggg catggcacag ctccacctga
301 cctggatctc tctgctatta atgacaaaag catcgtcaaa aagacgccac agttagcaaa
361 aacaatatca aagaaacctg agtcaacatc attttctgcc cctcggaaaa agagcccgga
421 tttatctgaa gcaatggaaa tgatggagtc tcagacacta ctgctgacgc tactatccgt
481 aaagatggag aacaatcttg ctgagtttga aagaagggca gaaaagaatt tattaataat
541 gtgtaaggag aaggagaagc tacagaaaaa ggcccacgag ctgaagcgca ggcttctcct
601 ctctcagagg aagcgggagc tggcagatgt cctggatgcc cagatcgaga tgctcagccc
661 cttcgaggca gtggccacac gcttcaagga gcaatacagg acattcgcca cggccctgga
721 cactaccagg cacgagctgc ccgtgaggtc catccacctg gagggagatg ggcagcagct
781 cttagacgcc ctgcagcatg aactggtgac cactcagcgc ctcctgggag aacttgatgt
841 tggtgattcg gaagaaaatg tgcaggtgct ggacttactg agcgaactca aggacgtgac
901 ggcgaaaaag gaccttgagc tccgaaggag ctttgcccag gtgctggaac tctccgcaga
961 ggcaagcaaa gaggcagcct tggcaaacca ggaagtctgg gaagagaccc agggcatggc
1021 gccccccagc cggtggtatt tcaatcaaga cagtgcctgc agagaatctg ggggagcacc
1081 caagaacacg cccctgtctg aggacgacaa cccgggtgcc tcgtcagccc ccgctcaggc
1141 cacgttcatc agcccaagcg aagatttttc ttcaagcagc caggcagaag tcccgccctc
1201 tctctctcgt tcagggaggg acttgtcatg actcatggtt acattcagga tacttgagca
1261 ctttatatac taccgtagca ctgtagctat tttttatgtg ataatcttgt ttgataaaaa
1321 agtaaacctg ttttgcaatt gaagcctcca ttttctatga aggggccagt tggaaaaaaa
1381 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaa
//