LOCUS BC004395 2053 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens apolipoprotein L, 2, mRNA (cDNA clone MGC:10978 IMAGE:3636011), complete cds. ACCESSION BC004395 VERSION BC004395.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2053) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2053) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (12-MAR-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 13 Row: h Column: 4 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 22035654. FEATURES Location/Qualifiers source 1..2053 /db_xref="H-InvDB:HIT000031913" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:10978 IMAGE:3636011" /tissue_type="Placenta, choriocarcinoma" /clone_lib="NIH_MGC_21" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..2053 /gene="APOL2" /gene_synonym="APOL-II" /db_xref="GeneID:23780" /db_xref="HGNC:HGNC:619" /db_xref="MIM:607252" CDS 205..1218 /gene="APOL2" /gene_synonym="APOL-II" /codon_start=1 /product="apolipoprotein L, 2" /protein_id="AAH04395.1" /db_xref="GeneID:23780" /db_xref="HGNC:HGNC:619" /db_xref="MIM:607252" /translation="MNPESSIFIEDYLKYFQDQVSRENLLQLLTDDEAWNGFVAAAEL PRDEADELRKALNKLASHMVMKDKNRHDKDQQHRQWFLKEFPRLKRELEDHIRKLRAL AEEVEQVHRGTTIANVVSNSVGTTSGILTLLGLGLAPFTEGISFVLLDTGMGLGAAAA VAGITCSVVELVNKLRARAQARNLDQSGTNVAKVMKEFVGGNTPNVLTLVDNWYQVTQ GIGRNIRAIRRARANPQLGAYAPPPHVIGRISAEGGEQVERVVEGPAQAMSRGTMIVG AATGGILLLLDVVSLAYESKHLLEGAKSESAEELKKRAQELEGKLNFLTKIHEMLQPG QDQ" BASE COUNT 580 a 468 c 587 g 418 t ORIGIN 1 gctggacgtg ggatccacac agctcagaac agttggatct tgctcagtct ctgtcagagg 61 aagatccctt ggacaagagg accctgcctt ggtgtgagag tgagggtaga ggaagctgga 121 acgagggtta aggaaaacct tccagtctgg acagtgactg gagagctcca aggaaagccc 181 ctcggtaacc cagccgctgg caccatgaac ccagagagca gtatctttat tgaggattac 241 cttaagtatt tccaggacca agtgagcaga gagaatctgc tacaactgct gactgatgat 301 gaagcctgga atggattcgt ggctgctgct gaactgccca gggatgaggc agatgagctc 361 cgtaaagctc tgaacaagct tgcaagtcac atggtcatga aggacaaaaa ccgccacgat 421 aaagaccagc agcacaggca gtggtttttg aaagagtttc ctcggttgaa aagggagctt 481 gaggatcaca taaggaagct ccgtgccctt gcagaggagg ttgagcaggt ccacagaggc 541 accaccattg ccaatgtggt gtccaactct gttggcacta cctctggcat cctgaccctc 601 ctcggcctgg gtctggcacc cttcacagaa ggaatcagtt ttgtgctctt ggacactggc 661 atgggtctgg gagcagcagc tgctgtggct gggattacct gcagtgtggt agaactagta 721 aacaaattgc gggcacgagc ccaagcccgc aacttggacc aaagcggcac caatgtagca 781 aaggtgatga aggagtttgt gggtgggaac acacccaatg ttcttacctt agttgacaat 841 tggtaccaag tcacacaagg gattgggagg aacatccgtg ccatcagacg agccagagcc 901 aaccctcagt taggagcgta tgccccaccc ccgcatgtca ttgggcgaat ctcagctgaa 961 ggcggtgaac aggttgagag ggttgttgaa ggccccgccc aggcaatgag cagaggaacc 1021 atgatcgtgg gtgcagccac tggaggcatc ttgcttctgc tggatgtggt cagccttgca 1081 tatgagtcaa agcacttgct tgagggggca aagtcagagt cagctgagga gctgaagaag 1141 cgggctcagg agctggaggg gaagctcaac tttctcacca agatccatga gatgctgcag 1201 ccaggccaag accaatgacc ccagagcagt gcagccacca gggcagaaat gccgggcaca 1261 ggccaggaca aaatgcagac tttttttttt tttttttttt tttttgagat ggagtctcgc 1321 tctatcgccc aggatggagt gcagtggctc aatctcggct cactgcaaac tccgcctccc 1381 gggttcacac cattctccgg cctcagtctc ccgagtagct gggactacag gcacctgcca 1441 ccacgcccgg ctaatttttt tgtattttca ctggagacgg ggtttcactg tgttagccac 1501 gatggtctcc atctcctgac ctcgtgatct gcccacctcg gcctcccaaa gtgctgggat 1561 tacaggcgtg agccaccgcg cctggccaaa atgcagacat tttattaggg ggataaggag 1621 ggcaaggtaa agcttatgga actgagtgtt agtgactttg gcatttgtgt agctgagcac 1681 agcaagggag gggttaatgc agatggcaag tgcaccaagg agaaggcagg aacactggag 1741 cctgcaataa gggaggagag aggactggag agtgtgggga atgggaagaa gtagtttact 1801 ttggactaaa gaatatattg ggcgaagaat agagggggag cttgcaggaa ccagcaatga 1861 gaaggccagg aaaagaaaga gctgaaaatg gagaaaacca gagttagaac tgttggatac 1921 aggagaagaa acagcagctc cactaccgac ccccccccag gtttgatgtc cttccaagaa 1981 taaagtcttt ccctggtgaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa 2041 aaaaaaaaaa aaa //