LOCUS BC004393 796 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens alkB, alkylation repair homolog 7 (E. coli), mRNA
(cDNA clone MGC:10974 IMAGE:3635540), complete cds.
ACCESSION BC004393
VERSION BC004393.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 796)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 796)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (12-MAR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 13 Row: f Column: 2
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 39930600.
FEATURES Location/Qualifiers
source 1..796
/db_xref="H-InvDB:HIT000031912"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:10974 IMAGE:3635540"
/tissue_type="Placenta, choriocarcinoma"
/clone_lib="NIH_MGC_21"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..796
/gene="ALKBH7"
/gene_synonym="MGC10974"
/gene_synonym="UNQ6002"
/db_xref="GeneID:84266"
/db_xref="HGNC:HGNC:21306"
CDS 44..709
/gene="ALKBH7"
/gene_synonym="MGC10974"
/gene_synonym="UNQ6002"
/codon_start=1
/product="alkB, alkylation repair homolog 7 (E. coli)"
/protein_id="AAH04393.1"
/db_xref="GeneID:84266"
/db_xref="HGNC:HGNC:21306"
/translation="MAGTGLLALRTLPGPSWVRGSGPSVLSRLQDAAVVRPGFLSTAE
EETLSRELEPELRRRRYEYDHWDAAIHGFRETEKSRWSEASRAILQRVQAAAFGPGQT
LLSSVHVLDLEARGYIKPHVDSIKFCGATIAGLSLLSPSVMRLVHTQEPGEWLELLLE
PGSLYILRGSARYDFSHEILRDEESFFGERRIPRGRRISVICRSLPEGMGPGESGQPP
PAC"
BASE COUNT 151 a 264 c 246 g 135 t
ORIGIN
1 cgttccccaa ccctgccctc tctcatgacc ccgctccggg attatggccg ggactgggct
61 gctggcgctg cggacgctgc cagggcccag ctgggtgcga ggctcgggcc cttccgtgct
121 gagccgcctg caggacgcgg ccgtggtgcg gcctggcttc ctgagcacgg cagaggagga
181 gacgctgagc cgagaactgg agcccgagct gcgccgccgc cgctacgaat acgatcactg
241 ggacgcggcc atccacggct tccgagagac agagaagtcg cgctggtcag aagccagccg
301 ggccatcctg cagcgcgtgc aggcggccgc ctttggcccc ggccagaccc tgctctcctc
361 cgtgcacgtg ctggacctgg aagcccgcgg ctacatcaag ccccacgtgg acagcatcaa
421 gttctgcggg gccaccatcg ccggcctgtc tctcctgtct cccagcgtta tgcggctggt
481 gcacacccag gagccggggg agtggctgga actcttgctg gagccgggct ccctctacat
541 ccttaggggc tcagcccgtt atgacttctc ccatgagatc cttcgggatg aagagtcctt
601 ctttggggaa cgccggattc cccggggccg gcgcatctcc gtgatctgcc gctccctccc
661 tgagggcatg gggccagggg agtctggaca gccgccccca gcctgctgac ccccagcttt
721 ctacagacac cagatttgtg aataaagttg gggaatggac agcctaaaaa aaaaaaaaaa
781 aaaaaaaaaa aaaaaa
//