LOCUS BC004317 1837 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens Nedd4 family interacting protein 1, mRNA (cDNA clone
MGC:10924 IMAGE:3628100), complete cds.
ACCESSION BC004317
VERSION BC004317.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1837)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1837)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-MAR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 13 Row: o Column: 10
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 33519472.
FEATURES Location/Qualifiers
source 1..1837
/db_xref="H-InvDB:HIT000031861"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:10924 IMAGE:3628100"
/tissue_type="Brain, neuroblastoma"
/clone_lib="NIH_MGC_19"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1837
/gene="NDFIP1"
/gene_synonym="MGC10924"
/gene_synonym="N4WBP5"
/db_xref="GeneID:80762"
/db_xref="HGNC:HGNC:17592"
CDS 105..770
/gene="NDFIP1"
/gene_synonym="MGC10924"
/gene_synonym="N4WBP5"
/codon_start=1
/product="Nedd4 family interacting protein 1"
/protein_id="AAH04317.1"
/db_xref="GeneID:80762"
/db_xref="HGNC:HGNC:17592"
/translation="MALALAALAAVEPACGSRYQQLQNEEESGEPEQAAGDAPPPYSS
ISAESAAYFDYKDESGFPKPPSYNVATTLPSYDEAERTKAEATIPLVPGRDEDFVGRD
DFDDADQLRIGNDGIFMLTFFMAFLFNWIGFFLSFCLTTSAAGRYGAISGFGLSLIKW
ILIVRFSTYFPGYFDGQYWLWWVFLVLGFLLFLRGFINYAKVRKMPETFSNLPRTRVL
FIY"
BASE COUNT 507 a 367 c 390 g 573 t
ORIGIN
1 ccaaggcgcg tccccctcgg cctcccagcg ctcccaagcc gcagcggccg cgccccttca
61 gctagctcgc tcgctcgctc tgcttccctg ctgccggctg cgccatggcg ttggcgttgg
121 cggcgctggc ggcggtcgag ccggcctgcg gcagccggta ccagcagttg cagaatgaag
181 aagagtctgg agaacctgaa caggctgcag gtgatgctcc tccaccttac agcagcattt
241 ctgcagagag cgcagcatat tttgactaca aggatgagtc tgggtttcca aagcccccat
301 cttacaatgt agctacaaca ctgcccagtt atgatgaagc ggagaggacc aaggctgaag
361 ctactatccc tttggttcct gggagagatg aggattttgt gggtcgggat gattttgatg
421 atgctgacca gctgaggata ggaaatgatg ggattttcat gttaactttt ttcatggcat
481 tcctctttaa ctggattggg tttttcctgt ctttttgcct gaccacttca gctgcaggaa
541 ggtatggggc catttcagga tttggtctct ctctaattaa atggatcctg attgtcaggt
601 tttccaccta tttccctgga tattttgatg gtcagtactg gctctggtgg gtgttccttg
661 ttttaggctt tctcctgttt ctcagaggat ttatcaatta tgcaaaagtt cggaagatgc
721 cagaaacttt ctcaaatctc cccaggacca gagttctctt tatttattaa agatgttttc
781 tggcaaaggc cttcctgcat ttatgaattc tctctcaaga agcaagagaa cacctgcagg
841 aagtgaatca agatgcagaa cacagaggaa taatcacctg ctttaaaaaa ataaagtact
901 gttgaaaaga tcatttctct ctatttgttc ctaggtgtaa aattttaata gttaatgcag
961 aattctgtaa tcattgaatc attagtggtt aatgtttgaa aaagctcttg caatcaagtc
1021 tgtgatgtat taataatgcc ttatatattg tttgtagtca ttttaagtag catgagccat
1081 gtccctgtag tcggtagggg gcagtcttgc tttattcatc ctccatctca aaatgaactt
1141 ggaattaaat attgtaagat atgtataatg ctggccattt taaaggggtt ttctcaaaag
1201 ttaaactttt gttatgactg tgtttttgca cataatccat atttgctgtt caagttaatc
1261 tagaaattta ttcaattctg tatgaacacc tggaagcaaa atcatagtgc aaaaatacat
1321 ttaaggtgtg gtcaaaaata agtctttaat tggtaaataa taagcattaa ttttttatag
1381 cctgtattca caattctgcg gtaccttatt gtacctaagg gattctaaag gtgttgtcac
1441 tgtataaaac agaaagcact aggatacaaa tgaagcttaa ttactaaaat gtaattcttg
1501 acactctttc tataattagc gttcttcacc cccaccccca cccccacccc ccttattttc
1561 cttttgtctc ctggtgatta ggccaaagtc tgggagtaag gagaggatta ggtacttagg
1621 agcaaagaaa gaagtagctt ggaacttttg agatgatccc taacatactg tactacttgc
1681 ttttacaatg tgttagcaga aaccagtggg ttataatgta gaatgatgtg ctttctgccc
1741 aagtggtaat tcatcttggt ttgctatgtt aaaactgtaa atacaacaga acattaataa
1801 atatctcttg tgtagcaaaa aaaaaaaaaa aaaaaaa
//