LOCUS BC004304 1457 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens uroplakin 3B, mRNA (cDNA clone MGC:10902
IMAGE:3625247), complete cds.
ACCESSION BC004304
VERSION BC004304.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1457)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1457)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-MAR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 13 Row: a Column: 6
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 33149305.
FEATURES Location/Qualifiers
source 1..1457
/db_xref="H-InvDB:HIT000031854"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:10902 IMAGE:3625247"
/tissue_type="Uterus, endometrium adenocarcinoma"
/clone_lib="NIH_MGC_44"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1457
/gene="UPK3B"
/gene_synonym="FLJ32198"
/gene_synonym="MGC10902"
/gene_synonym="P35"
/gene_synonym="UPIIIb"
/db_xref="GeneID:80761"
/db_xref="HGNC:HGNC:21444"
CDS 55..1017
/gene="UPK3B"
/gene_synonym="FLJ32198"
/gene_synonym="MGC10902"
/gene_synonym="P35"
/gene_synonym="UPIIIb"
/codon_start=1
/product="uroplakin 3B"
/protein_id="AAH04304.1"
/db_xref="GeneID:80761"
/db_xref="HGNC:HGNC:21444"
/translation="MGLPWGQPHLGLQMLLLALNCLRPSLSLGEWGSWMDASSQTQGA
GGPAGVIGPWAPAPLRLGEAAPGTPTPVSVAHLLSPVATELVPYTPQITAWDLEGKVT
ATTFSLEQPRCVFDGLASASDTVWLVVAFSNASRGFQNPETLADIPASPQLLTDGHYM
TLPLSPDQLPCGDPMAGSGGAPVLRVGHDHGCHQQPFCNAPLPGPGPYREDPRIHRHL
ARAAKWQHDRHYLHPLFSGRPPTLGLLGSLYHALLQPVVAGGGPGAAADRLLHGQALH
DPPHPTQRGRHTAGGLQAWPGPPPQPQPLAWPLCMGLGEMGRRE"
BASE COUNT 237 a 525 c 406 g 289 t
ORIGIN
1 gcagcccgaa gcagccagac cagcccctga gcctcccggg tgctggcagc tgtcatgggg
61 ctaccctggg ggcagcctca cctagggctg cagatgctcc tcctggcgtt gaactgtctc
121 cggcccagcc tgagcctggg tgagtggggg tcctggatgg acgcgtccag ccagacccaa
181 ggggctgggg gccctgctgg agtgattgga ccctgggcgc ccgcccccct ccgattggga
241 gaggcagccc cagggacccc cacgcccgtc tccgtggctc accttttgtc ccccgtggcc
301 acagagctgg tgccctacac accacagata acagcttggg acctggaagg gaaggtcaca
361 gccaccacct tctccctgga gcagccgcgc tgtgtcttcg atgggcttgc cagcgccagc
421 gataccgtct ggctcgtggt ggccttcagc aatgcctcca ggggcttcca gaacccggag
481 acactggctg acattccggc ctccccacag ctgctgaccg atggccacta catgacgctg
541 cccctgtctc cggaccagct gccctgtggc gaccccatgg cgggcagcgg aggcgccccc
601 gtgctgcggg tgggccatga ccacggctgc caccagcagc ccttctgcaa cgcgcccctc
661 cctggccctg gaccctatcg ggaagacccc cggatccatc gacacctggc cagggcggcg
721 aagtggcagc atgatcgtca ttacctccat cctctcttct ctggccggcc tcctactctt
781 ggccttcttg gcagcctcta ccatgcgctt ctccagcctg tggtggccgg aggaggcccc
841 ggagcagctg cggatcggct ccttcatggg caagcgctac atgacccacc acatcccacc
901 cagcgaggcc gccacactgc cggtgggctg caagcctggc ctggaccccc tccccagcct
961 cagcccctag cctggcctct ttgcatgggg ctgggggaga tggggcgccg ggagtgagtg
1021 catggtgctt tgtcccagct cctgcaccca caggccccct cagggctcct tgcctttccc
1081 ccccaccagc acaccccgta ccctgcctgg aatcccagca ccagcccccc tgcctctcct
1141 ctgcctttct ggtttctctc cctctccaag catctgtaag ttgcactcag gagggtttag
1201 gggagggcca tgggcaggct ggtctcgtga tagtgagtga gtgctcatgg gatctggttg
1261 tttagaagca tgcagcacct cctgcttcac tctctctgtc tctcctgctc caccatggcc
1321 agaaacgtgc ctgcttcccc ttcgccttct gccgtgattg tcagtttctt gagggctccc
1381 cagccatgct tcctgtacag cctgcaaaac tgtgagtcaa ttaaacctct tttcttcata
1441 aaaaaaaaaa aaaaaaa
//