LOCUS BC004271 1528 bp mRNA linear HTC 26-APR-2004
DEFINITION Homo sapiens carnosine dipeptidase 1 (metallopeptidase M20 family),
mRNA (cDNA clone IMAGE:3614507), with apparent retained intron.
ACCESSION BC004271
VERSION BC004271.1
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1528)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1528)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (01-MAR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Steve Jones, Sarah Barber, Mabel Brown-John, Yaron Butterfield,
Andy Chan, Steve S. Chand, William Chow, Alison Cloutier, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Amara Masson, Mike R. Mayo, Josh Moran, Ryan Morin,
Teika Olson, Diana Palmquist, Anca Petrescu, Anna Liisa Prahbu,
Parvaneh Saeedi, JR Santos, Angelique Schnerch, Ursula Skalska,
Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie
Schein, Asim Siddiqui, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 13 Row: f Column: 3
This clone has the following problem: retained intron.
FEATURES Location/Qualifiers
source 1..1528
/db_xref="H-InvDB:HIT000031833"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3614507"
/tissue_type="Skin, melanotic melanoma."
/clone_lib="NIH_MGC_20"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
BASE COUNT 443 a 337 c 328 g 420 t
ORIGIN
1 ttcaagttga gatttggtgg ggacacagcc aaaccacatc aggcaacttg tgcaattttt
61 ttcttctgtt gttacttagg atcttcctgt gaatatcaaa ttcatcattg aggggatgga
121 agaggctggc tctgttgccc tggaggaact tgtggaaaaa gaaaaggacc gattcttctc
181 tggtgtggac tacattgtaa tttcagataa cctgtggatc agccaaagga agccagcaat
241 cacttatgga acccggggga acagctactt catggtggag gtgaaatgca gagaccagga
301 ttttcactca ggaacctttg gtggcatcct tcatgaacca atggctgatc tggttgctct
361 tctcggtagc ctggtagact cgtctggtca tatcctggtc cctggaatct atgatgaagt
421 ggttcctctt acagaagagg aaataaatac atacaaagcc atccatctag acctagaaga
481 ataccggaat agcagccggg ttgagaaatt tctgttcgat actaaggagg agattctaat
541 gcacctctgg aggtacccat ctctttctat tcatgggatc gagggcgcgt ttgatgagcc
601 tggaactaaa acagtcatac ctggccgagt tataggaaaa ttttcaatcc gtctagtccc
661 tcacatgaat gtgtctgcgg tggaaaaaca ggtgacacga catcttgaag atgtgttctc
721 caaaagaaat agttccaaca agatggttgt ttccatgact ctaggactac acccgtggat
781 tgcaaatatt gatgacaccc agtatctcgc agcaaaaaga gcgatcagaa cagtgtttgg
841 aacagaacca gatatgatcc gggatggatc caccattcca attgccaaaa tgttccagga
901 gatcgtccac aagagcgtgg tgctaattcc gctgggagct gttgatgatg gagaacattc
961 gcagaatgag aaaatcaaca ggtggaacta catagaggga accaaattat ttgctgcctt
1021 tttcttagag atggcccagc tccattaatc acaagaacct tctagtctga tctgatccac
1081 tgacagattc acctccccca catccctaga cagggatgga atgtaaatat ccagagaatt
1141 tgggtctagt atagtacatt ttcccttcca tttaaaatgt cttgggatat ctggatcagt
1201 aataaaatat ttcaaaggca cagatgttgg aaatggttta aggtccccca ctgcacacct
1261 tcctcaagtc atagctgctt gcagcaactt gatttcccca agtcctgtgc aatagcccca
1321 ggattggatt ccttccaacc ttttagcata tctccaacct tgcaatttga ttggcataat
1381 cactccggtt tgctttctag gtcctcaagt gctcgtgaca cataatcatt ccatccaatg
1441 atcgcctttg ctttaccact ctttcctttt atcttattaa taaaaatgtt ggtctccacc
1501 actgactaca aaaaaaaaaa aaaaaaaa
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