LOCUS BC004255 1269 bp mRNA linear HUM 22-FEB-2007
DEFINITION Homo sapiens zinc finger and SCAN domain containing 16, mRNA (cDNA
clone MGC:10653 IMAGE:3609511), complete cds.
ACCESSION BC004255
VERSION BC004255.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1269)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1269)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-MAR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 13 Row: a Column: 17
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 13376833.
FEATURES Location/Qualifiers
source 1..1269
/db_xref="H-InvDB:HIT000031822"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:10653 IMAGE:3609511"
/tissue_type="Uterus, endometrium adenocarcinoma"
/clone_lib="NIH_MGC_44"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1269
/gene="ZSCAN16"
/gene_synonym="dJ265C24.3"
/db_xref="GeneID:80345"
/db_xref="HGNC:HGNC:20813"
CDS 75..1121
/gene="ZSCAN16"
/gene_synonym="dJ265C24.3"
/codon_start=1
/product="zinc finger and SCAN domain containing 16"
/protein_id="AAH04255.1"
/db_xref="GeneID:80345"
/db_xref="HGNC:HGNC:20813"
/translation="MTTALEPEDQKGLLIIKAEDHYWGQDSSSQKCSPHRRELYRQHF
RKLCYQDAPGPREALTQLWELCRQWLRPECHTKEQILDLLVLEQFLSILPKDLQAWVR
AHHPETGEEAVTVLEDLERELDEPGKQVPGNSERRDILMDKLAPLGRPYESLTVQLHP
KKTQLEQEAGKPQRNGDKTRTKNEELFQKEDMPKDKEFLGEINDRLNKDTPQHPKSKD
IIENEGRSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQR
SHLIGHHRVHTGVKPYKCKECGKDFSGRTGLIQHQRIHTGEKPYECDECGRPFRVSSA
LIRHQRIHTANKLY"
BASE COUNT 432 a 271 c 305 g 261 t
ORIGIN
1 caaaggacgc tagctgttgc acctgttcct ccctgcgcgt aagatagagg ataaatctcc
61 tggcaaagcc cagaatgacc acagccctgg aacctgagga ccaaaaagga cttctgataa
121 ttaaggcaga ggaccattac tggggacagg attccagctc acaaaagtgc agtcctcaca
181 ggagggaact ctatagacaa cacttcagga agctctgcta tcaggatgca cctggacccc
241 gtgaagctct tacccagctg tgggagctct gccgtcagtg gctgaggcca gaatgccaca
301 ccaaggagca gattttagac ctgctggtgc tagaacagtt cctgagcatt cttcctaaag
361 acctgcaagc atgggtgcgt gcacaccatc cagagactgg agaggaggca gtgacggtac
421 tggaggatct ggagagagag cttgatgaac ctggaaagca ggtcccaggc aattcagaaa
481 gacgggacat actcatggac aagttggccc ccttgggaag gccatatgaa tcactgactg
541 tccagctcca tcccaaaaag acccagctgg agcaggaagc tgggaaacca caaaggaatg
601 gtgataaaac taggactaag aatgaagagt tgttccagaa ggaagatatg cccaaagaca
661 aggaattcct tggggagata aatgacagac tgaacaaaga tactcctcag catcctaagt
721 ccaaagatat tattgaaaat gagggcagat cagaatggca acagagggaa agaagacgat
781 ataaatgtga tgaatgtggg aaaagtttca gtcatagctc agaccttagt aaacacagga
841 gaactcacac gggagagaag ccctataaat gtgatgagtg tggaaaagcc ttcattcagc
901 gctcacatct cattggacat catagagtac acacgggagt aaaaccctat aaatgtaaag
961 aatgtgggaa agacttcagt gggcgcacag gtcttattca gcatcagaga atccacacag
1021 gtgaaaaacc ctatgaatgt gatgagtgtg gaaggccttt ccgagtaagt tcagctctta
1081 ttagacatca aagaattcat accgcaaata aactctacta atatagcagt aatatcaaaa
1141 gttctttgga cactcaggcc taactagtta tcaaagaatc tattttagaa accttgagtt
1201 tcctcaatgt ggtcaaagct tcagtcatca ttaaacttct ctggaccaaa gaaaaaaaaa
1261 aaaaaaaaa
//