LOCUS BC004254 2206 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens heterogeneous nuclear ribonucleoprotein F, mRNA (cDNA
clone MGC:10565 IMAGE:3633625), complete cds.
ACCESSION BC004254
VERSION BC004254.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2206)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2206)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-MAR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 13 Row: k Column: 22
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 14141150.
FEATURES Location/Qualifiers
source 1..2206
/db_xref="H-InvDB:HIT000031821"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:10565 IMAGE:3633625"
/tissue_type="Ovary, adenocarcinoma"
/clone_lib="NIH_MGC_9"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2206
/gene="HNRPF"
/gene_synonym="HNRNPF"
/gene_synonym="mcs94-1"
/db_xref="GeneID:3185"
/db_xref="HGNC:HGNC:5039"
/db_xref="MIM:601037"
CDS 324..1571
/gene="HNRPF"
/gene_synonym="HNRNPF"
/gene_synonym="mcs94-1"
/codon_start=1
/product="heterogeneous nuclear ribonucleoprotein F"
/protein_id="AAH04254.1"
/db_xref="GeneID:3185"
/db_xref="HGNC:HGNC:5039"
/db_xref="MIM:601037"
/translation="MMLGPEGGEGFVVKLRGLPWSCSVEDVQNFLSDCTIHDGAAGVH
FIYTREGRQSGEAFVELGSEDDVKMALKKDRESMGHRYIEVFKSHRTEMDWVLKHSGP
NSADSANDGFVRLRGLPFGCTKEEIVQFFSGLEIVPNGITLPVDPEGKITGEAFVQFA
SQELAEKALGKHKERIGHRYIEVFKSSQEEVRSYSDPPLKFMSVQRPGPYDRPGTARR
YIGIVKQAGLERMRPGAYSTGYGGYEEYSGLSDGYGFTTDLFGRDLSYCLSGMYDHRY
GDSEFTVQSTTGHCVHMRGLPYKATENDIYNFFSPLNPVRVHIEIGPDGRVTGEADVE
FATHEEAVAAMSKDRANMQHRYIELFLNSTTGASNGAYSSQVMQGMGVSAAQATYSGL
ESQSVSGCYGAGYSGQNSMGGYD"
BASE COUNT 586 a 475 c 582 g 563 t
ORIGIN
1 gtcgtggaag caggactgcg ccgcgtcttc ctcaaggtgg ggttcggggg gccaccgaat
61 cgctgtcacg ccggcaggtt gagaacaaaa acatgcacct ggagtttccc cggagccctc
121 tgcgtggttg agcttcggtg gaatttcggg gctcttggct gccagccgcg cttgcctggt
181 agcaacagaa accagtcctg ctctcctccg tggacatttc attaccatcc agaagtgtct
241 cccactgaag gcatccgtgg ttgtttttaa gccacaaaaa agccacaccc aagatcacct
301 gacacccacc ctgacaagtg tccatgatgc tgggccctga gggaggtgaa ggctttgtgg
361 tcaagctccg tggcctgccc tggtcctgct ctgttgagga cgtgcagaac ttcctctctg
421 actgcacgat tcatgatggg gccgcaggtg tccatttcat ctacactaga gagggcaggc
481 agagtggtga ggcttttgtt gaacttggat cagaagatga tgtaaaaatg gccctgaaaa
541 aagacaggga aagcatggga caccggtaca ttgaggtgtt caagtcccac agaaccgaga
601 tggattgggt gttgaagcac agtggtccca acagtgccga cagcgccaac gatggcttcg
661 tgcggcttcg aggactccca tttggatgca caaaggaaga aattgttcag ttcttctcag
721 ggttggaaat tgtgccaaac gggatcacat tgcctgtgga ccccgaaggc aagattacag
781 gggaagcgtt cgtgcagttt gcctcgcagg agttagctga gaaggctcta gggaaacaca
841 aggagaggat agggcacagg tacattgagg tgtttaagag cagccaggag gaagttaggt
901 catactcaga tccccctctg aagttcatgt ccgtgcagcg gccagggccc tatgaccggc
961 ccgggactgc caggaggtac attggcatcg tgaagcaggc aggcctggaa aggatgaggc
1021 ctggtgccta cagcacaggc tacgggggct acgaggagta cagtggcctc agtgatggct
1081 acggcttcac caccgacctg ttcgggagag acctcagcta ctgtctctcc gggatgtatg
1141 accacagata cggcgacagt gagttcacag tgcagagcac cacaggccac tgtgtccaca
1201 tgaggggcct gccgtacaaa gcgaccgaga acgacattta caacttcttc tctcctctca
1261 accctgtgag agtccatatt gagattggcc cagatggaag agtgacgggt gaagcagatg
1321 ttgagtttgc tactcatgaa gaagctgtgg cagctatgtc caaagacagg gccaatatgc
1381 agcacagata tatagaactc ttcttgaatt caacaacagg ggccagcaat ggggcgtata
1441 gcagccaggt gatgcaaggc atgggggtgt ctgctgccca ggccacttac agtggcctgg
1501 agagccagtc agtgagtggc tgttacgggg ccggctacag tgggcagaac agcatgggtg
1561 gctatgacta gttttgttag gaacatttga gttacttcaa tcattttcac aggcagccaa
1621 caagcaatta agagcagtta taatagagga agctggggga cccattttgc accatgagtt
1681 tgtgaaaaat ctggattaaa aaattacctc ttcagtgttt tctcatgcaa aattttcttc
1741 tagcatgtga taatgagtaa actaaaacta ttttcagctt ttctcaatta acattttggt
1801 agtatacttc agagtgatgt tatctaagtt taagtagttt aagtatgtta aatgtggatc
1861 ttttacacca catcacagtg aacacactgg ggagacgtgc ttttttggaa aactcaaagg
1921 tgctagctcc ctgattcaaa gaaatatttc tcatgtttgt tcattctagt ttatattttc
1981 atttaaaatc ctttaggtta agtttaagct ttttaaaagt tagttttgag aattgagaca
2041 caatactaat actgtaggaa ttggtgaggc cttgacttaa aactttcttt gtactgtgat
2101 ttccttttgg gtgtattttg ctaagtgaaa cttgttaaat tttttgttaa ctaaattttt
2161 ttcttaaaat aaagactttt tcacaaaaaa aaaaaaaaaa aaaaaa
//