LOCUS BC004202 1893 bp mRNA linear HUM 08-OCT-2003 DEFINITION Homo sapiens CHK1 checkpoint homolog (S. pombe), mRNA (cDNA clone MGC:3717 IMAGE:3530606), complete cds. ACCESSION BC004202 VERSION BC004202.2 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1893) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1893) AUTHORS Strausberg,R. TITLE Direct Submission JOURNAL Submitted (01-MAR-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Cancer Genomics Office, National Cancer Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Aug 20, 2003 this sequence version replaced BC004202.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Institute for Systems Biology http://www.systemsbiology.org contact: amadan@systemsbiology.org Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 11 Row: g Column: 21 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 20127419. FEATURES Location/Qualifiers source 1..1893 /db_xref="H-InvDB:HIT000031777" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:3717 IMAGE:3530606" /tissue_type="Muscle, rhabdomyosarcoma" /clone_lib="NIH_MGC_17" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..1893 /gene="CHEK1" /gene_synonym="CHK1" /db_xref="GeneID:1111" /db_xref="MIM:603078" CDS 60..1490 /gene="CHEK1" /gene_synonym="CHK1" /codon_start=1 /product="CHEK1 protein" /protein_id="AAH04202.1" /db_xref="GeneID:1111" /db_xref="MIM:603078" /translation="MAVPFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKR AVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGM PEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR ERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEY SDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARITIPDIKKDRWYNKPLKKGAKRP RVTSGGVSESPSGFSKHIQSNLDFSPVNSASSEENVKYSSSQPEPRTGLSLWDTSPSY IDKLVQGISFSQPTCPDHMLLNSQLLGTPGSSQNPWQRLVKRMTRFFTKLDADKSYQC LKETCEKLGYQWKKSCMNQVTISTTDRRNNKLIFKVNLLEMDDKILVDFRLSKGDGLE FKRHFLKIKGKLIDIVSSQKVWLPAT" misc_feature 84..854 /gene="CHEK1" /gene_synonym="CHK1" /note="S_TKc; Region: Serine/Threonine protein kinases, catalytic domain" /db_xref="CDD:smart00220" BASE COUNT 585 a 377 c 437 g 494 t ORIGIN 1 gcatttggat tcctgcagtg gtgggcaaag gacagtccgc cgaggtgctc ggtggagtca 61 tggcagtgcc ctttgtggaa gactgggact tggtgcaaac cctgggagaa ggtgcctatg 121 gagaagttca acttgctgtg aatagagtaa ctgaagaagc agtcgcagtg aagattgtag 181 atatgaagcg tgccgtagac tgtccagaaa atattaagaa agagatctgt atcaataaaa 241 tgctaaatca tgaaaatgta gtaaaattct atggtcacag gagagaaggc aatatccaat 301 atttatttct ggagtactgt agtggaggag agctttttga cagaatagag ccagacatag 361 gcatgcctga accagatgct cagagattct tccatcaact catggcaggg gtggtttatc 421 tgcatggtat tggaataact cacagggata ttaaaccaga aaatcttctg ttggatgaaa 481 gggataacct caaaatctca gactttggct tggcaacagt atttcggtat aataatcgtg 541 agcgtttgtt gaacaagatg tgtggtactt taccatatgt tgctccagaa cttctgaaga 601 gaagagaatt tcatgcagaa ccagttgatg tttggtcctg tggaatagta cttactgcaa 661 tgctcgctgg agaattgcca tgggaccaac ccagtgacag ctgtcaggag tattctgact 721 ggaaagaaaa aaaaacatac ctcaaccctt ggaaaaaaat cgattctgct cctctagctc 781 tgctgcataa aatcttagtt gagaatccat cagcaagaat taccattcca gacatcaaaa 841 aagatagatg gtacaacaaa cccctcaaga aaggggcaaa aaggccccga gtcacttcag 901 gtggtgtgtc agagtctccc agtggatttt ctaagcacat tcaatccaat ttggacttct 961 ctccagtaaa cagtgcttct agtgaagaaa atgtgaagta ctccagttct cagccagaac 1021 cccgcacagg tctttcctta tgggatacca gcccctcata cattgataaa ttggtacaag 1081 ggatcagctt ttcccagccc acatgtcctg atcatatgct tttgaatagt cagttacttg 1141 gcaccccagg atcctcacag aacccctggc agcggttggt caaaagaatg acacgattct 1201 ttaccaaatt ggatgcagac aaatcttatc aatgcctgaa agagacttgt gagaagttgg 1261 gctatcaatg gaagaaaagt tgtatgaatc aggttactat atcaacaact gataggagaa 1321 acaataaact cattttcaaa gtgaatttgt tagaaatgga tgataaaata ttggttgact 1381 tccggctttc taagggtgat ggattggagt tcaagagaca cttcctgaag attaaaggga 1441 agctgattga tattgtgagc agccagaagg tttggcttcc tgccacatga tcggaccatc 1501 ggctctgggg aatcctgatg gagtttcact cttgtctccc aggctggagt acaatggcat 1561 gatctcagct tactgcaacc tccgtctcct gggttcaagc gattctcctg cctcagcctt 1621 ccaagtagct gggattacag gtgcccacca ccacacctgg ctaggttttg tatttttagt 1681 agagatgggg tttttttcat gttggccagg ctgatctgga actcctgacc tcaagtgatc 1741 cacctgcctt ggcctcccaa agtgctggga ttttaggtgt gagccacctc gcctggcaag 1801 ggattctgtt cttagtcctt gaaaaaataa agttctgaat cttcaaaaaa aaaaaaaaaa 1861 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaa //