LOCUS BC004163 1960 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens THUMP domain containing 2, mRNA (cDNA clone MGC:2454
IMAGE:2961526), complete cds.
ACCESSION BC004163
VERSION BC004163.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1960)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1960)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-MAR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC004163.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 2 Row: p Column: 10
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 34147387.
FEATURES Location/Qualifiers
source 1..1960
/db_xref="H-InvDB:HIT000031746"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:2454 IMAGE:2961526"
/tissue_type="Muscle, rhabdomyosarcoma"
/clone_lib="NIH_MGC_17"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1960
/gene="THUMPD2"
/gene_synonym="MGC2454"
/db_xref="GeneID:80745"
/db_xref="HGNC:HGNC:14890"
CDS 89..1510
/gene="THUMPD2"
/gene_synonym="MGC2454"
/codon_start=1
/product="THUMP domain containing 2"
/protein_id="AAH04163.1"
/db_xref="GeneID:80745"
/db_xref="HGNC:HGNC:14890"
/translation="MREVRARLAATQVEYISGKVFFTTCSDLNMLKKLKSAERLFLLI
KKQFPLIISSVSKGKIFNEMQRLINEDPGSWLNAISIWKNLLELDAKKEKLSQRDDNQ
LKRKVGENEIIAKKLKIEQMQKIEENRDCQLEKQIKEETLEQRDFTTKSEKFQEEEFQ
NDIEKAIDTHNQNDLTFRVSCRCSGTIGKAFTAQEVGKVIGIAIMKHFGWKADLRNPQ
LEIFIHLNDIYSVVGIPVFRVSLASRAYIKTAGLRSTIAWAMASLADIKAGAFVLDPM
CGLGTILLEAAKEWPDVYYVGADVSDSQLLGTWDNLKAAGLEDKIELLKISVIELPLP
SESVDIIISDIPFGKKFKLGKDIKSILQEMERVLHVGGTIVLLLSEDHHRRLTDCKES
NIPFNSKDSHTDEPGIKKCLNPEEKTGAFKTASTSFEASNHKFLDRMSPFGSLVPVEC
YKVSLGKTDAFICKYKKSHSSGL"
BASE COUNT 653 a 334 c 433 g 540 t
ORIGIN
1 gtcggaggcg cgtggagagc cagggtccgg gcctgaggct ggcgcccgat tcttctgcac
61 tgcgggtcgc ggcctggagc cgttcgtaat gcgagaggtg cgggcgcggc tggcggccac
121 gcaggttgaa tatatttcag gaaaggtttt tttcaccacc tgttctgatt tgaatatgtt
181 gaagaaatta aaatctgcag aaagattatt tttgctgatt aaaaagcagt ttccacttat
241 tatttcttct gtaagtaaag gaaaaatatt taatgaaatg caaagactta taaatgaaga
301 tccaggaagt tggttgaatg ccatttcaat ttggaaaaat cttcttgaac ttgatgcaaa
361 aaaggaaaaa ctttctcaga gagatgataa ccaactaaaa agaaaagtgg gagaaaatga
421 aatcattgca aagaaattaa aaatagaaca aatgcaaaag atagaagaga atagggactg
481 ccagctggaa aaacaaataa aagaagaaac tctggagcaa agagatttta ccactaaaag
541 cgaaaagttt caagaagaag aatttcagaa tgacatagag aaagcaattg atactcataa
601 tcagaatgac ttgactttca gagtatcttg tcgctgcagt ggaactattg gaaaggcctt
661 cactgcacag gaggtaggaa aagtaattgg aattgctatt atgaaacact ttggatggaa
721 agcagacttg aggaatccac aattagagat ctttatacat ctaaatgaca tttactctgt
781 ggtggggatt cctgtgttca gggtttccct agccagcaga gcttacatca agacagctgg
841 actgcgatct acaatagcgt gggcaatggc atctctggct gacattaagg ctggtgcatt
901 tgttttagat ccaatgtgtg gacttggaac aatacttttg gaagctgcta aagaatggcc
961 agatgtgtat tatgtaggtg ctgatgtcag cgactcacag ttactaggta cttgggacaa
1021 tctgaaagct gcaggccttg aggataaaat tgaattactt aaaatctctg ttatagaatt
1081 gccattgcct tcagaaagtg ttgatattat tatttctgac attccatttg ggaaaaagtt
1141 taagttagga aaagacatca aaagcattct acaagaaatg gaaagagtgc ttcatgttgg
1201 cggaaccatt gtattgttgc ttagtgaaga tcaccacagg cgccttacag attgtaaaga
1261 gagcaacatc cctttcaatt ccaaggacag tcacacagat gaacctggaa ttaaaaagtg
1321 cttgaatcct gaagaaaaaa ctggtgcatt caagacagcg tcaacttcat tcgaagccag
1381 taaccacaaa ttcttagaca gaatgtcacc atttggctcc ttggtaccag tggaatgcta
1441 caaagttagc cttggaaaga cagatgcgtt catatgtaaa tataagaagt cgcactcttc
1501 tggactgtag caggcttgct gccatcagcc gggttcaggc ccttgtaagt tagctgtaca
1561 gcagaagttt gctgtctcta ggattcatat agcacccaca gagctccaag taaccaaatt
1621 cccccaaaga caggaggtgt ggctgatggg tacacatgct tggtaagagt ttctgcttta
1681 tattctaaag tacttaatgt ttttgagaaa aaagttaccg aatatttttt agacttaagt
1741 tttatcttct gtcagaatgt gaaaagttct gcccagtttc tgagcaaaaa cttcaatttc
1801 aaaataaagg ttttcagggg ttcacttaag tgtatcacaa tcaacaccag acgggatatt
1861 ttaactatca gattttcgga aatgtaaaaa cctttatgtg taacttcttt tgatattaaa
1921 cttgattttt gagcctgtaa caaaaaaaaa aaaaaaaaaa
//