LOCUS BC004161 1725 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens tetraspanin 15, mRNA (cDNA clone MGC:2447
IMAGE:2958221), complete cds.
ACCESSION BC004161
VERSION BC004161.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1725)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1725)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-MAR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC004161.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 2 Row: k Column: 4
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 54792144.
FEATURES Location/Qualifiers
source 1..1725
/db_xref="H-InvDB:HIT000031744"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:2447 IMAGE:2958221"
/tissue_type="Kidney, renal cell adenocarcinoma"
/clone_lib="NIH_MGC_14"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1725
/gene="TSPAN15"
/gene_synonym="2700063A19Rik"
/gene_synonym="NET-7"
/db_xref="GeneID:23555"
/db_xref="HGNC:HGNC:23298"
CDS 120..1004
/gene="TSPAN15"
/gene_synonym="2700063A19Rik"
/gene_synonym="NET-7"
/codon_start=1
/product="tetraspanin 15"
/protein_id="AAH04161.1"
/db_xref="GeneID:23555"
/db_xref="HGNC:HGNC:23298"
/translation="MPRGDSEQVRYCARFSYLWLKFSLIIYSTVFWLIGALVLSVGIY
AEVERQKYKTLESAFLAPAIILILLGVVMFMVSFIGVLASLRDNLYLLQAFMYILGIC
LIMELIGGVVALTFRNQTIDFLNDNIRRGIENYYDDLDFKNIMDFVQKKFKCCGGEDY
RDWSKNQYHDCSAPGPLACGVPYTCCIRNTTEVVNTMCGYKTIDKERFSVQDVIYVRG
CTNAVIIWFMDNYTIMAGILLGILLPQFLGVLLTLLYITRVEDIIMEHSVTDGLLGPG
AKPSVEAAGTGCCLCYPN"
BASE COUNT 360 a 481 c 490 g 394 t
ORIGIN
1 agagaacgcc ggtggcgggg ctggtagccc ggcagccgca ggtggggcca cgagcgctgg
61 ctgagggacc gagccggaga gccccggagc ccccgtaacc cgcgcgggga gcgcccagga
121 tgccgcgcgg ggactcggag caggtgcgct actgcgcgcg cttctcctac ctctggctca
181 agttttcact tatcatctat tccaccgtgt tctggctgat tggggccctg gtcctgtctg
241 tgggcatcta tgcagaggtt gagcggcaga aatataaaac ccttgaaagt gccttcctgg
301 ctccagccat catcctcatc ctcctgggcg tcgtcatgtt catggtctcc ttcattggtg
361 tgctggcgtc cctccgtgac aacctgtacc ttctccaagc attcatgtac atccttggga
421 tctgcctcat catggagctc attggtggcg tggtggcctt gaccttccgg aaccagacca
481 ttgacttcct gaacgacaac attcgaagag gaattgagaa ctactatgat gatctggact
541 tcaaaaacat catggacttt gttcagaaaa agttcaagtg ctgtggcggg gaggactacc
601 gagattggag caagaatcag taccacgact gcagtgcccc tggacccctg gcctgtgggg
661 tgccctacac ctgctgcatc aggaacacga cagaagttgt caacaccatg tgtggctaca
721 aaactatcga caaggagcgt ttcagtgtgc aggatgtcat ctacgtgcgg ggctgcacca
781 acgccgtgat catctggttc atggacaact acaccatcat ggcgggcatc ctcctgggca
841 tcctgcttcc ccagttcctg ggggtgctgc tgacgctgct gtacatcacc cgggtggagg
901 acatcatcat ggagcactct gtcactgatg ggctccttgg gcccggtgcc aagcccagcg
961 tggaggcggc aggcacggga tgctgcttgt gctaccccaa ttagggccca gcctgccatg
1021 gcagctccaa caaggaccgt ctgggatagc acctctcagt caacatcgtg gggctggaca
1081 gggctgcggc ccctctgccc acactcagta ctgaccaaag ccagggctgt gtgtgcctgt
1141 gtgtaggtcc cacggcctct gcctccccag ggagcagagc ctgggcctcc cctaagaggc
1201 tttccccgag gcagctctgg aatctgtgcc cacctggggc ctggggaaca aggccctcct
1261 ttctccaggc ctgggctaca ggggagggag agcctgaggc tctgctcagg gcccatttca
1321 tctctggcag tgccttggcg gtggtattca aggcagtttt gtagcacctg taattgggga
1381 gagggagtgt gcccctcggg gcaggaggga agggcatctg gggaagggca ggagggaaga
1441 gctgtccatg cagccacgcc catggccagg ttggcctctt ctcagcctcc caggtgcctt
1501 gagccctctt gcaagggcgg ctgcttcctt gagcctagtt tttttacgtg atttttgtaa
1561 cattcatttt tttgtacaga taacaggagt ttctgactaa tcaaagctgg tatttccccg
1621 catgtcttat tcttgccctt cccccaacca gtttgttaat caaacaataa aaacatgttt
1681 tgttttgttt tttaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaa
//