LOCUS BC004154 1658 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens nuclear receptor subfamily 2, group F, member 1, mRNA
(cDNA clone MGC:2388 IMAGE:2824138), complete cds.
ACCESSION BC004154
VERSION BC004154.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1658)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1658)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-MAR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC004154.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 2 Row: h Column: 21.
FEATURES Location/Qualifiers
source 1..1658
/db_xref="H-InvDB:HIT000031738"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:2388 IMAGE:2824138"
/tissue_type="Lung, small cell carcinoma"
/clone_lib="NIH_MGC_7"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1658
/gene="NR2F1"
/gene_synonym="COUP-TFI"
/gene_synonym="EAR-3"
/gene_synonym="EAR3"
/gene_synonym="NR2F2"
/gene_synonym="SVP44"
/gene_synonym="TCFCOUP1"
/db_xref="GeneID:7025"
/db_xref="HGNC:HGNC:7975"
/db_xref="MIM:132890"
CDS 89..1360
/gene="NR2F1"
/gene_synonym="COUP-TFI"
/gene_synonym="EAR-3"
/gene_synonym="EAR3"
/gene_synonym="NR2F2"
/gene_synonym="SVP44"
/gene_synonym="TCFCOUP1"
/codon_start=1
/product="nuclear receptor subfamily 2, group F, member 1"
/protein_id="AAH04154.1"
/db_xref="GeneID:7025"
/db_xref="HGNC:HGNC:7975"
/db_xref="MIM:132890"
/translation="MAMVVSSWRDPQDDVAGGNPGGPNPAAQAARGGGGGAGEQQQQA
GSGAPHTPQTPGQPGAPATPGTAGDKGQGPPGSGQSQQHIECVVCGDKSSGKHYGQFT
CEGCKSFFKRSVRRNLTYTCRANRNCPIDQHHRNQCQYCRLKKCLKVGMRREAVQRGR
MPPTQPNPGQYALTNGDPLNGHCYLSGYISLLLRAEPYPTSRYGSQCMQPNNIMGIEN
ICELAARLLFSAVEWARNIPFFPDLQITDQVSLLRLTWSELFVLNAAQCSMPLHVAPL
LAAAGLHASPMSADRVVAFMDHIRIFQEQVEKLKALHVDSAEYSCLKAIVLFTSDACG
LSDAAHIESLQEKSQCALEEYVRSQYPNQPSRFGKLLLRLPSLRTVSSSVIEQLFFVR
LVGKTPIETLIRDMLLSGSSFNWPYMSIQCS"
BASE COUNT 356 a 572 c 484 g 246 t
ORIGIN
1 cttccccttc ccctcccagc gcgcccgcgc gccccgcggc cctcggcgag cagctcggct
61 ccccccagcg ctccccgggc ccaaagatat ggcaatggta gttagcagct ggcgagatcc
121 gcaggacgac gtggccgggg gcaaccccgg cggccccaac cccgcagcgc aggcggcccg
181 cggcggcggc ggcggcgccg gcgagcagca gcagcaggcg ggctcgggcg cgccgcacac
241 gccgcagacc ccgggccagc ccggagcgcc cgccaccccc ggcacggcgg gggacaaggg
301 ccagggcccg cccggttcgg gccagagcca gcagcacatc gagtgcgtgg tgtgcgggga
361 caagtcgagc ggcaagcact acggccaatt cacctgcgag ggctgcaaaa gtttcttcaa
421 gaggagcgtc cgcaggaact taacttacac atgccgtgcc aacaggaact gtcccatcga
481 ccagcaccac cgcaaccagt gccaatactg ccgcctcaag aagtgcctca aagtgggcat
541 gaggcgggaa gcggttcagc gaggaagaat gcctccaacc cagcccaatc caggccagta
601 cgcactcacc aacggggacc ccctcaacgg ccactgctac ctgtccggct acatctcgct
661 gctgctgcgc gccgagccct accccacgtc gcgctacggc agccagtgca tgcagcccaa
721 caacattatg ggcatcgaga acatctgcga gctggccgcg cgcctgctct tcagcgccgt
781 cgagtgggcc cgcaacatcc ccttcttccc ggatctgcag atcaccgacc aggtgtccct
841 gctacgcctc acctggagcg agctgttcgt gctcaacgcg gcccagtgct ctatgccgct
901 gcacgtggcg ccgttgctgg ccgccgccgg cctgcatgcc tcgcccatgt ctgccgaccg
961 cgtcgtggcc ttcatggacc acatccgcat cttccaggag caggtggaga agctcaaggc
1021 gctacacgtc gactcagccg agtacagctg cctcaaagcc atcgtgctgt tcacgtcaga
1081 cgcctgtggc ctgtcggatg cggcccacat cgagagcctg caggagaagt cgcagtgcgc
1141 actggaggag tacgtgagga gccagtaccc caaccagccc agccgttttg gcaaactgct
1201 gctgcgactg ccctcgctgc gcaccgtgtc ctcctccgtc atcgagcagc tcttcttcgt
1261 ccgtttggta ggtaaaaccc ccatcgaaac tctcatccgc gatatgttac tgtctgggag
1321 cagcttcaac tggccttaca tgtccatcca gtgctcctag accttgggcg cttcccacct
1381 gccccgtccc cctagagact cagaggaccc acctgggcca aggactccaa agccgcgggg
1441 acaccgggaa gtgcagcggg ccaggcaggc tgggtgggag ggaggagggc cgagacagga
1501 gcagcccacc cagcagaaat acaatccgag ctacaaagca tgggaaaaag agactctttt
1561 aggatcagat ctgtgagcac gttggcgagg aaaaacaaaa caaacaaaaa aaagaacctt
1621 gtgtctgtct ggtgaaaaaa aaaaaaaaaa aaaaaaaa
//