LOCUS BC004121 1359 bp mRNA linear HUM 01-SEP-2006
DEFINITION Homo sapiens occludin/ELL domain containing 1, mRNA (cDNA clone
IMAGE:3927742), complete cds.
ACCESSION BC004121
VERSION BC004121.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1359)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1359)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-MAR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 20, 2003 this sequence version replaced BC004121.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 14 Row: j Column: 6
This clone has the following problem: The cds is short compared to
the longest cds in the locus.
FEATURES Location/Qualifiers
source 1..1359
/db_xref="H-InvDB:HIT000050431"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3927742"
/tissue_type="Ovary, adenocarcinoma"
/clone_lib="NIH_MGC_9"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1359
/gene="OCEL1"
/gene_synonym="FLJ22709"
/gene_synonym="FWP009"
/gene_synonym="S863-9"
/db_xref="GeneID:79629"
/db_xref="HGNC:HGNC:26221"
CDS 237..353
/gene="OCEL1"
/gene_synonym="FLJ22709"
/gene_synonym="FWP009"
/gene_synonym="S863-9"
/codon_start=1
/product="OCEL1 protein"
/protein_id="AAH04121.1"
/db_xref="GeneID:79629"
/db_xref="HGNC:HGNC:26221"
/translation="MSCSPRPSWAPRSLLEPSLRGISLGPTQCPTMSLSTRQ"
BASE COUNT 298 a 426 c 376 g 259 t
ORIGIN
1 caggacccgc ccatcagccc ggaaacccct gagctgcttc tcccggaggc cgatgcccac
61 ccgggagccc ccaaagactc gcggctcccg ggggcacctg catactcacc cgcctgggcc
121 tgggcccccg ctgcagggac tggcgccccg aggcctcaaa accagcgccc cccgccctcc
181 gtgccagccc cagccgggac cccacaaggc aaagaccaag aagattgtgt ttgaggatga
241 gttgctctcc caggccctcc tgggcgccaa gaagcctatt ggagccatcc ctaaggggca
301 taagcctagg ccccacccag tgcccgacta tgagcttaag tacccgccag tgagcagtga
361 gagggaacgg agccgctatg tcgcagtgtt ccaggaccag tacggagagt tcttggagct
421 ccagcacgag gtggggtgtg cacaggcaaa gctcaggcag ctggaggccc tgctgagctc
481 cctgccccca ccccaaagcc agaaggaggc ccaagttgca gcccgggttt ggagggagtt
541 tgagatgaag cgaatggcgg gagtgcagtg gtatgatctc agctcactgc aacctcagcg
601 tcccgggttc aagcggttct cctgcctcag ctgggatcac aggcgcccac caccgtgcct
661 ggcaaatttt tgtatttgta gtagagatgg ggtttcacca tgttggccag gctggtctcg
721 aactcctgac ctcaagtgat ccgcccacct cggcctccca gactgctggg attacaggca
781 tgagccacct tgcccggctc acccggtcgc ctgtgcccag tttcaaggag agaaaattga
841 ggctcggaga atgaaaggca gagagttaag cagcttgaag gccacagggc agactgctgc
901 aaagacttcc gggtctcgcc ctgcctagga tcctggcttc ctggacaagc aggctcgctg
961 ccactacctg aagggtaaac tgaggcatct caagactcag atccagaaat tcgatgacca
1021 aggagacagc gagggctccg tgtacttcta agtgcccctg cagatgggca gagggatgca
1081 tggggatgca ggtcccttgc atttcttggt atctctcagc ttttcctctt gcagctcccc
1141 ctaccagggg tcgctttctc ctggattgca aatgcctctt cagtttggac tcagctctga
1201 cagcccctcc tccaggaagg ccttccagga cttcctcctc tgggtcctct agctctgacc
1261 ctacagggac tccagatctc aacctgttcc ctggaagtag ggcctgctct ccatcccagt
1321 gaaataaaca tgtattagac aaaaaaaaaa aaaaaaaaa
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