LOCUS BC004100 1171 bp mRNA linear HUM 28-JUL-2006
DEFINITION Homo sapiens phosphatidylinositol glycan anchor biosynthesis, class
H, mRNA (cDNA clone MGC:10360 IMAGE:3936489), complete cds.
ACCESSION BC004100
VERSION BC004100.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1171)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1171)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-MAR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Nov 6, 2003 this sequence version replaced BC004100.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 14 Row: h Column: 14
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 24430187.
FEATURES Location/Qualifiers
source 1..1171
/db_xref="H-InvDB:HIT000031704"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:10360 IMAGE:3936489"
/tissue_type="Lung, small cell carcinoma"
/clone_lib="NIH_MGC_7"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1171
/gene="PIGH"
/gene_synonym="GPI-H"
/db_xref="GeneID:5283"
/db_xref="HGNC:HGNC:8964"
/db_xref="MIM:600154"
CDS 49..615
/gene="PIGH"
/gene_synonym="GPI-H"
/codon_start=1
/product="phosphatidylinositol glycan anchor biosynthesis,
class H"
/protein_id="AAH04100.1"
/db_xref="GeneID:5283"
/db_xref="HGNC:HGNC:8964"
/db_xref="MIM:600154"
/translation="MEDERSFSDICGGRLALQRRYYSPSCREFCLSCPRLSLRSLTAV
TCTVWLAAYGLFTLCENSMILSAAIFITLLGLLGYLHFVKIDQETLLIIDSLGIQMTS
SYASGKESTTFIEMGKVKDIVINEAIYMQKVIYYLCILLKDPVEPHGISQVVPVFQSA
KPRLDCLIEVYRSCQEILAHQKATSTSP"
BASE COUNT 313 a 278 c 277 g 303 t
ORIGIN
1 cgagcgcagt gcagcgccgt gcggtgcggg cggccgagtg ggggcgtcat ggaggatgag
61 cggagctttt cggatatctg cggcggccgc ctggcgctgc agcgccgcta ctactccccg
121 tcctgccggg aattctgcct cagctgccct cggctctcgc tgcgttcgct caccgctgtc
181 acctgcacgg tgtggctggc ggcctacgga ctcttcaccc tctgcgagaa cagcatgatc
241 ctctctgctg ccatcttcat caccctctta ggtctgcttg gttatctcca ttttgtgaag
301 attgatcagg agactctgtt aatcattgat tcccttggca ttcagatgac ttcatcttat
361 gcttcaggca aagaaagcac taccttcata gaaatgggca aggtcaagga tattgtcatc
421 aatgaggcca tttacatgca gaaggtgatt tactacctct gcatcttatt gaaagatcca
481 gtggaaccac atgggatatc ccaagtagta cccgtcttcc agagtgccaa gccccggctg
541 gactgcttga ttgaagtata caggagctgc caggagatcc tggcacacca gaaagccaca
601 tcaacaagcc catgagcccc agcgttcaga aggccagcat tgtcttccat gggagatgac
661 tcttaagcca taggggctgg ttttccgtac tccaaaccat caggtggaca cagtcctagg
721 aaccattatg gatgtagtgc atcttagagc catagagcag gtgactggaa atctaactca
781 gtatatttcc gtgtattata gtgttttcct tgtaaggttt tgcctacttt accaaaggag
841 gggagacctt aagaattttg acacagtatg tcaaaagtaa tgtcagcaaa gaacactttc
901 ggaaattgct aagcatgttc aggtttactt tgttgatgtt tgtgaagcaa aacaatggga
961 aactgacatc agatgtcttg agaaagctat attttccaat agtacccctt gtgtaaagtt
1021 acgaaaaaaa caagcccttc agtactggtt agcaggaaga aatgtcctac aaaagacgag
1081 tctgtcaacc tagtgcctgt gttctgtaca gggcttattt atttactgtt aataaacaga
1141 tcttccaaaa caaaaaaaaa aaaaaaaaaa a
//