LOCUS BC003688 2645 bp mRNA linear HUM 03-NOV-2008 DEFINITION Homo sapiens pentatricopeptide repeat domain 1, mRNA (cDNA clone IMAGE:3453948), partial cds. ACCESSION BC003688 VERSION BC003688.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2645) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2645) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (28-FEB-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 4 Row: a Column: 23. FEATURES Location/Qualifiers source 1..2645 /db_xref="H-InvDB:HIT000031698" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:3453948" /tissue_type="Placenta, choriocarcinoma" /clone_lib="NIH_MGC_10" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene <1..2645 /gene="PTCD1" /db_xref="GeneID:26024" /db_xref="HGNC:HGNC:22198" CDS <1..1790 /gene="PTCD1" /codon_start=3 /product="PTCD1 protein" /protein_id="AAH03688.2" /db_xref="GeneID:26024" /db_xref="HGNC:HGNC:22198" /translation="AAQFHNLRFGERRDEQMEPEPKLWRGRRNTPYWYFLQCKHLIKE GKLVEALDLFERQMLKEERLQPMESNYTVLIGGCGRVGYLKKAFNLYNQMKKRDLEPS DATYTALFNVCAESPWKDSALQSALKLRQQLQAKNFELNLKTYHALLKMAAKCADLRM CLDVFKEIIHKGHVVTEETFSFLLMGCIQDKKTGFRYALQVWRLMLSLGLQPSRDSYN LLLVAARDCGLGDPQVASELLLKPREEATVLQPPVSRQRPRRTAQAKAGNLMSAMLHV EALERQLFLEPSQALGPPEPPEARVPGKAQPEVDTKAEPSHTAALTAVALKPPPVELE VNLLTPGAVPPTVVSFGTVTTPADRLALIGGLEGFLSKMAEHRQQPDIRTLTLLAEVV ESGSPAESLLLALLDEHQVEADLTFFNTLVRKKSKLGDLEGAKALLPVLAKRGLVPNL QTFCNLAIGCHRPKDGLQLLTDMKKSQVTPNTHIYSALINAAIRKLNYTYLISILKDM KQNRVPVNEVVIRQLEFAAQYPPTFDRYQGKNTYLEKIDGFRAYYKQWLTVMPAEETP HPWQKFRTKPQGDQDTGKEADDGCALGGR" BASE COUNT 631 a 782 c 782 g 450 t ORIGIN 1 ccgcagccca gttccataac ctgcggtttg gggaacggag agatgagcaa atggaaccgg 61 agcccaaatt atggcgaggc cggagaaaca ccccgtactg gtacttcttg cagtgcaaac 121 acctgatcaa ggaagggaag ctggttgaag ccctggacct gtttgagagg cagatgctga 181 aggaggagcg attgcagccc atggagagca actacacggt gctgattggg ggctgcgggc 241 gggttggcta cctgaagaag gccttcaacc tctacaacca gatgaaaaag cgggacctgg 301 agccctcgga cgccacctac acggccctgt tcaacgtctg tgccgagtcc ccctggaagg 361 actcagctct acagagcgcc ctgaagctcc ggcagcagct gcaggccaaa aacttcgagc 421 tcaacttgaa aacataccac gcgctgctga agatggctgc caagtgcgca gaccttagga 481 tgtgcctcga tgtgttcaag gaaatcatcc acaaagggca cgtggtcaca gaggagacct 541 tcagtttcct gctcatgggc tgcatccaag acaagaagac aggcttccgg tacgccctcc 601 aggtgtggcg gctgatgctg agtctagggc tacagccgag ccgggacagc tacaacctgc 661 tgttggtggc agctcgggac tgtggcctag gggaccccca ggtggcctca gagctgcttc 721 tgaagcccag ggaggaggcg actgtgcttc agcccccagt gagcaggcag cggccaagga 781 ggacagccca ggccaaggca ggcaacctca tgtcagccat gctgcatgtg gaggccctgg 841 agaggcagct gtttctggaa ccttctcagg cacttgggcc tccagagcct ccggaagcca 901 gagtgcccgg caaggcccaa ccagaggtgg atactaaggc agagcccagc cacacagcag 961 cactcaccgc agtggccctg aagccacctc ccgtggagct ggaagtcaac ctcctgaccc 1021 ctggggccgt tccccctaca gtggtctcct ttggaacggt gaccacccca gctgaccggc 1081 tggccttgat agggggcctg gagggcttcc tgagcaagat ggcagagcac aggcagcagc 1141 ccgacatcag gaccctcacg ctactggccg aggtggtgga gtccgggagt cctgcagagt 1201 ccttgctgct ggccctcctg gatgagcacc aggtagaggc cgacctgaca ttctttaaca 1261 cgctggtgag aaagaagagc aagctgggag acctggaggg ggccaaggcg ctgttgccgg 1321 tcctggcaaa gaggggcctc gtccccaacc tgcagacatt ctgcaacctg gccatcgggt 1381 gccacaggcc gaaggacggt ctacagcttc tcacagacat gaagaagtcc caggtgaccc 1441 ccaacactca catctacagt gccctcatca acgcggccat caggaagctg aactacacct 1501 atctcatcag catcttgaag gacatgaagc agaacagggt cccggtgaac gaagtggtca 1561 tccgccagct ggagtttgca gcccagtacc ctcccacctt tgaccggtac caagggaaga 1621 acacctacct ggagaagatt gacggcttcc gagcctatta caagcagtgg ctgacagtga 1681 tgcccgcaga ggaaaccccg cacccctggc agaagttccg gaccaagccc cagggggacc 1741 aggacaccgg caaggaggct gatgacggat gtgcccttgg gggcaggtga tgggagcaca 1801 gctggaacaa tgtgctcggc ccccagtgct ctgtgggagc cccaggacaa gtgagctggt 1861 gtcacctcct gcctggggga agagccaggc cctgaggaac agccgcagcg tgtcacaggt 1921 gttggtgagg acacacacta ggcccaaggt gcctgtgctc ccagcaggtc caagtgcagc 1981 tccagccacc tttgcgtgtc accttcacgg gacttccagc tccagctacc tttgtgtgtc 2041 acctcacaca ccacaagggg gctggggcat ctggtccctg gggcctgggc cgccccgccg 2101 ggttccatag gccgatgctc tgaaagaaga gacgtggggc tcgagagatt taaagatttt 2161 atttttacaa atcacagctg atagacagcg aagccttccc catagagacc gtgctccaac 2221 tcgggcctgg ggcactgctc gctgctccca ggaagggggt ggcgtgacag gcaggaacct 2281 gcgaagtcca gagtccaggg tggagcgcac cagcctcagc cagagcagcc acgacagcca 2341 cagtgtgtgc actcgatgat gcggccctgc aacggaggag gacagtgaga cgatgccact 2401 gcgccacgct cgcccctgca cactcacata tgtggcaacc ctcccacgaa ggacctgcca 2461 ccatgccata tagggacaca cctcagaaac ccttccttga cagctctgga cagggaaaat 2521 ttggctccct catgaaggta gaaccagctg ctgttgacac cgaggttaca tctgtatgtc 2581 tatttataat atgttctgca aatccaacac acgtttgcca atcaagaaaa aaaaaaaaaa 2641 aaaaa //