LOCUS BC003663 2059 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens nucleoporin 62kDa, mRNA (cDNA clone MGC:841
IMAGE:3050260), complete cds.
ACCESSION BC003663
VERSION BC003663.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2059)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2059)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (26-FEB-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC003663.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 3 Row: b Column: 22
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 34335248.
FEATURES Location/Qualifiers
source 1..2059
/db_xref="H-InvDB:HIT000031681"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:841 IMAGE:3050260"
/tissue_type="Skin, melanotic melanoma."
/clone_lib="NIH_MGC_20"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2059
/gene="NUP62"
/gene_synonym="DKFZp547L134"
/gene_synonym="FLJ20822"
/gene_synonym="MGC841"
/gene_synonym="p62"
/db_xref="GeneID:23636"
/db_xref="HGNC:HGNC:8066"
/db_xref="MIM:605815"
CDS 333..1901
/gene="NUP62"
/gene_synonym="DKFZp547L134"
/gene_synonym="FLJ20822"
/gene_synonym="MGC841"
/gene_synonym="p62"
/codon_start=1
/product="nucleoporin 62kDa"
/protein_id="AAH03663.1"
/db_xref="GeneID:23636"
/db_xref="HGNC:HGNC:8066"
/db_xref="MIM:605815"
/translation="MSGFNFGGTGAPTGGFTFGTAKTATTTPATGFSFSTSGTGGFNF
GAPFQPATSTPSTGLFSLATQTPATQTTGFTFGTATLASGGTGFSLGIGASKLNLSNT
AATPAMANPSGFGLGSSNLTNAISSTVTSSQGTAPTGFVFGPSTTSVAPATTSGGFSF
TGGSTAQPSGFNIGSAGNSAQPTAPATLPFTPATPAATTAGATQPAAPTPTATITSTG
PSLFASIATAPTSSATTGLSLCTPVTTAGAPTAGTQGFSLKAPGAASGTSTTTSTAAT
ATATTTTSSSTTGFALNLKPLAPAGIPSNTAAAVTAPPGPGAAAGAAASSAMTYAQLE
SLINKWSLELEDQERHFLQQATQVNAWDRTLIENGEKITSLHREVEKVKLDQKRLDQE
LDFILSQQKELEDLLSPLEELVKEQSGTIYLQHADEEREKTYKLAENIDAQLKRMAQD
LKDIIEHLNTSGAPADTSDPLQQICKILNAHMDSLQWIDQNSALLQRKVEEVTKVCEG
RRKEQERSFRITFD"
BASE COUNT 481 a 654 c 560 g 364 t
ORIGIN
1 gagagagagg taagcggtta ctcactccat ggctgcagca aggagaggcg gcggcggcct
61 cggctgaaga aagaaggtgg gagcggagag cgcaggcgtg ccgaggtgga tgtccgtctt
121 ttctctgttg cagaaaccca ccttgtccca tccacatcag gacatcccag ctggagttca
181 accttcatcc cttctgtggc agttaggaga ctgaatcaag gtccagagaa ggtggaggaa
241 tcctgatact gagcgaaatc ttcccaaggc tgcagacacc gacggatttg ctttgggagc
301 cagagtagct gccgccacca gagtccggag ccatgagcgg gtttaatttt ggaggcactg
361 gggcccctac aggcgggttc acgtttggca ctgcaaagac ggcaacaacc acacctgcta
421 cagggttttc tttctccacc tctggcactg gagggtttaa ttttggggct cccttccaac
481 cagccacaag taccccttcc accggcctgt tctcacttgc cacccagact ccggccacac
541 agacgacagg cttcactttt ggaacagcga ctcttgcttc ggggggaact ggattttctt
601 tggggatcgg tgcttcaaag ctcaacttga gcaacacagc tgccacccca gccatggcaa
661 accccagcgg ctttgggctg ggcagcagca acctcactaa tgccatatcg agcaccgtca
721 cctccagcca gggcacagca cccaccggct ttgtgtttgg cccctccacc acctctgtgg
781 ctccagctac cacatctgga ggcttctcat tcactggtgg aagcacggcc caaccctccg
841 gtttcaacat tggctcagca gggaattcag cccagcccac ggcacctgcc acgttgccct
901 tcactccggc cacgccagca gccaccacag caggtgccac acagccagct gctcccacac
961 ccacagccac catcaccagt actgggccca gcctctttgc gtcaatagca actgctccaa
1021 cctcatctgc caccactgga ctctccctct gtacccctgt gaccacagcg ggcgccccca
1081 ctgctgggac acagggcttc agcttaaagg cacctggagc agcttccggc acctccacaa
1141 caacatccac cgctgccacc gccaccgcca ccaccaccac cagcagcagc accaccggct
1201 ttgccttgaa tttaaaacca ctggcgccag ccgggatccc cagcaataca gcagctgccg
1261 tgaccgctcc acctggccct ggcgcagctg caggggcggc tgccagctcc gccatgacct
1321 acgcgcagct ggagagcctg atcaacaaat ggagcctgga gctagaggac caggagcggc
1381 acttcctcca gcaggccacc caggtcaacg cctgggaccg cacgctgatc gagaatggag
1441 aaaagatcac cagcctgcac cgcgaggtgg agaaggtgaa gctggaccag aagaggctgg
1501 accaggagct cgacttcatc ctgtcccagc agaaggagct ggaagacctg ctgagcccac
1561 tggaggagtt ggtcaaggag cagagcggga ccatctacct gcagcacgcg gatgaggagc
1621 gtgagaaaac ctacaagctg gctgagaaca tcgacgcaca gctcaagcgc atggcccagg
1681 atctcaagga catcatcgag cacctgaaca cgtccggggc ccccgccgac accagtgacc
1741 cactgcagca gatctgcaag atcctcaatg cgcacatgga ctcactgcag tggatcgacc
1801 agaactcggc cctgctgcag aggaaggtgg aggaggtgac caaggtgtgc gagggccggc
1861 gcaaggagca ggagcgcagc ttccggatca cctttgactg agcgacagca gccctggggc
1921 ccgcaggtcc ctagggagtt catgagggga atgcgccctg ttgtctgtag tttggggttg
1981 tggcaagata cttgtttgtt tgtttctttt tttcacatga ctgcccttga catgaaaaaa
2041 aaaaaaaaaa aaaaaaaaa
//