LOCUS BC003650 1428 bp mRNA linear HUM 09-JUN-2008
DEFINITION Homo sapiens trafficking protein particle complex 9, mRNA (cDNA
clone IMAGE:3536176), partial cds.
ACCESSION BC003650
VERSION BC003650.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1428)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1428)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (26-FEB-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Nov 6, 2003 this sequence version replaced BC003650.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 11 Row: g Column: 10.
FEATURES Location/Qualifiers
source 1..1428
/db_xref="H-InvDB:HIT000031671"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3536176"
/tissue_type="Lung, small cell carcinoma"
/clone_lib="NIH_MGC_7"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene <1..1428
/gene="NIBP"
/gene_synonym="IBP"
/gene_synonym="IKBKBBP"
/gene_synonym="T1"
/gene_synonym="TRS120"
/db_xref="GeneID:83696"
/db_xref="HGNC:HGNC:30832"
/db_xref="MIM:611966"
CDS <1..1300
/gene="NIBP"
/gene_synonym="IBP"
/gene_synonym="IKBKBBP"
/gene_synonym="T1"
/gene_synonym="TRS120"
/codon_start=2
/product="NIBP protein"
/protein_id="AAH03650.3"
/db_xref="GeneID:83696"
/db_xref="HGNC:HGNC:30832"
/db_xref="MIM:611966"
/translation="EISTNVSVQLYNGESQQLIIKLENIGMEPLEKLEVTSKVLTTKE
KLYGDFLSWKLEETLAQFPLQPGKVATFTINIKVKLDFSCQENLLQDLSDDGISVSGF
PLSSPFRQVVRPRVEGKPVNPPESNKAGDYSHVKTLEAVLNFKYSGGPGHTEGYYRNL
SLGLHVEVEPSVFFTRVSTLPATSTRQCHLLLDVFNSTEHELTVSTRSSEALILHAGE
CQRMAIQVDKFNFESFPESPGEKGQFANPKQLEEERREARGLEIHSKLGICWRIPSLK
RSGEASVEGLLNQLVLEHLQLAPLQWDVLVDGQPCDREAVAACQVGDPVRLEVRLTNR
SPRSVGPFALTVVPFQDHQNGVHNYDLHDTVSFVGSSTFYLDAVQPSGQSACLGALLF
LYTGDFFLHIRFHEDSTSKELPPSWFCLPSVHVCALEAQA"
BASE COUNT 363 a 415 c 382 g 268 t
ORIGIN
1 tgaaatatct actaatgtat ctgtccagct ttacaatgga gaaagtcagc aactaatcat
61 taaattggaa aatattggaa tggaaccatt ggagaaactg gaggtcacct cgaaagttct
121 caccactaaa gaaaaattgt atggcgactt cttgagctgg aagctagagg aaacccttgc
181 ccagttccct ttgcagcctg ggaaggtggc cacgttcaca atcaacatca aagtgaagct
241 ggatttctcc tgccaggaga atctcctgca ggatctcagt gatgatggaa tcagtgtgag
301 tggctttccc ctgtccagtc cttttcggca ggtcgttcgg ccccgagtgg agggcaaacc
361 tgtgaaccca cccgagagca acaaagcagg cgactacagc cacgtgaaga ccctggaagc
421 tgtcctgaat ttcaaatact ctggaggccc gggccacact gaaggatatt acaggaatct
481 ctccctgggg ctgcatgtag aagtcgagcc gtctgtattt ttcacccgag tcagcaccct
541 cccagcaacc agtacccggc agtgtcacct gctcctggat gtcttcaact ccaccgagca
601 tgagctgacc gtcagcacca ggagcagcga ggcactcatc ctgcacgccg gcgagtgcca
661 gcgaatggct attcaagtgg acaagttcaa ctttgagagt ttcccggagt cccctgggga
721 gaaggggcaa tttgcaaacc ccaagcagct ggaggaagag cggcgggaag cccgaggcct
781 ggagatccac agcaagctgg gcatctgctg gagaatcccc tccctgaagc gcagtggcga
841 ggcgagtgtg gaaggactcc tgaaccagct cgtcctggag cacctgcagc tggcgcctct
901 gcagtgggat gtgctggtgg acggacagcc atgtgaccgc gaggctgtgg cggcctgcca
961 ggtgggcgac cccgtgcgcc tggaggtgcg gctgaccaac cggagcccgc gcagcgtagg
1021 gcccttcgcc ctcactgtgg tccccttcca ggaccaccag aacggcgtgc acaactacga
1081 cctgcacgac accgtctcct tcgtgggctc cagcaccttc tacctcgacg cggtgcagcc
1141 gtccggccag tcggcctgcc tcggggccct cctcttcctc tacacgggag acttcttcct
1201 ccacatccgg ttccacgagg acagcaccag caaggagctg ccaccctctt ggttctgcct
1261 gcccagtgtg cacgtgtgtg ccctggaggc gcaggcctga gcccgcctac ttccgtccct
1321 ctttctgcag ggccagaggt gaccctgcct ggcctcccaa aaaaaaaaaa aaaaaaaaaa
1381 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaa
//