LOCUS BC003624 1713 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens interferon gamma receptor 2 (interferon gamma
transducer 1), mRNA (cDNA clone MGC:2193 IMAGE:2967074), complete
cds.
ACCESSION BC003624
VERSION BC003624.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1713)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1713)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (26-FEB-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC003624.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 3 Row: k Column: 17
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 47419933.
FEATURES Location/Qualifiers
source 1..1713
/db_xref="H-InvDB:HIT000031652"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:2193 IMAGE:2967074"
/tissue_type="Skin, melanotic melanoma."
/clone_lib="NIH_MGC_20"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1713
/gene="IFNGR2"
/gene_synonym="AF-1"
/gene_synonym="IFGR2"
/db_xref="GeneID:3460"
/db_xref="HGNC:HGNC:5440"
/db_xref="MIM:147569"
CDS 117..1130
/gene="IFNGR2"
/gene_synonym="AF-1"
/gene_synonym="IFGR2"
/codon_start=1
/product="interferon gamma receptor 2 (interferon gamma
transducer 1)"
/protein_id="AAH03624.1"
/db_xref="GeneID:3460"
/db_xref="HGNC:HGNC:5440"
/db_xref="MIM:147569"
/translation="MRPTLLWSLLLLLGVFAAAAAAPPDPLSQLPAPQHPKIRLYNAE
QVLSWEPVALSNSTRPVVYQVQFKYTDSKWFTADIMSIGVNCTQITATECDFTAASPS
AGFPMDFNVTLRLRAELGALHSAWVTMPWFQHYRNVTVGPPENIEVTPGEGSLIIRFS
SPFDIADTSTAFFCYYVHYWEKGGIQQVKGPFRSNSISLDNLKPSRVYCLQVQAQLLW
NKSNIFRVGHLSNISCYETMADASTELQQVILISVGTFSLLSVLAGACFFLVLKYRGL
IKYWFHTPPSIPLQIEEYLKDPTQPILEALDKDSSPKDDVWDSVSIISFPEKEQEDVL
QTL"
BASE COUNT 443 a 444 c 403 g 423 t
ORIGIN
1 gcgggccctg cgcgccctgc gctcgccatg gcggtttggg cggcgacgtg agcggctccg
61 cggaccccga gcggggcccc ggccgcgacc tgagccgccg ccgagcgccc ggggccatgc
121 gaccgacgct gctgtggtcg ctgctgctgc tgctcggagt cttcgccgcc gccgccgcgg
181 ccccgccaga ccctctttcc cagctgcccg ctcctcagca cccgaagatt cgcctgtaca
241 acgcagagca ggtcctgagt tgggagccag tggccctgag caatagcacg aggcctgttg
301 tctaccaagt gcagtttaaa tacaccgaca gtaaatggtt cacggccgac atcatgtcca
361 taggggtgaa ttgtacacag atcacagcaa cagagtgtga cttcactgcc gccagtccct
421 cagcaggctt cccaatggat ttcaatgtca ctctacgcct tcgagctgag ctgggagcac
481 tccattctgc ctgggtgaca atgccttggt ttcaacacta tcggaatgtg actgtcgggc
541 ctccagaaaa cattgaggtg accccaggag aaggctccct catcatcagg ttctcctctc
601 cctttgacat cgctgatacc tccacggcct ttttttgtta ttatgtccat tactgggaaa
661 aaggaggaat ccaacaggtc aaaggccctt tcagaagcaa ctccatttca ttggataact
721 taaaaccctc cagagtgtac tgtttacaag tccaggcaca actgctttgg aacaaaagta
781 acatctttag agtcgggcat ttaagcaaca tatcttgcta cgaaacaatg gcagatgcct
841 ccactgagct tcagcaagtc atcctgatct ccgtgggaac attttcgttg ctgtcggtgc
901 tggcaggagc ctgtttcttc ctggtcctga aatatagagg cctgattaaa tactggtttc
961 acactccacc aagcatccca ttacagatag aagagtattt aaaagaccca actcagccca
1021 tcttagaggc cttggacaag gacagctcac caaaggatga cgtctgggac tctgtgtcca
1081 ttatctcgtt tccggaaaag gagcaagaag atgttctcca aacgctttga accaaagcat
1141 gggcctagcc cactggctcc ctggaagaga tcaagccatc ggagctgcta gagttctgtc
1201 tggactttcc agagaccagt attccctttt gctgcctcta aaaggcctgt ccctgcagac
1261 atgagagaca gcaggtctca tgggggtgac aagctttttt ttttttctta aagaattttc
1321 aaaatcaaat tccagaatga ttttacggag atatcccagg aaaattaagg cttctcttaa
1381 acactaaaaa ggcatgtaat tgcttgttag caaaatggat atgacacatc tctgatactt
1441 ttttcattat tggttgggct gagcagtcag aagacctggt cgtcgtcttg actttggcaa
1501 atgagccgga gccccttggg caggtcacac aacctgtccc agcgagggac accgagtggc
1561 ccttcatgta catccatggt gtgctggctt aaaatgtaat taatcttgta aatatactcc
1621 tagtaattta agattttgtt tttaaactgg aaataaaaga ttgtatagtg catgtttttt
1681 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaa
//