LOCUS       BC003621                2634 bp    mRNA    linear   HUM 15-JUL-2006
DEFINITION  Homo sapiens heterogeneous nuclear ribonucleoprotein U (scaffold
            attachment factor A), mRNA (cDNA clone MGC:1992 IMAGE:2966453),
            complete cds.
ACCESSION   BC003621
VERSION     BC003621.2
KEYWORDS    MGC.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 2634)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   2  (bases 1 to 2634)
  CONSRTM   NIH MGC Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-FEB-2001) National Institutes of Health, Mammalian
            Gene Collection (MGC), Bethesda, MD 20892-2590, USA
  REMARK    NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT     On Aug 19, 2003 this sequence version replaced BC003621.1.
            Contact: MGC help desk
            Email: cgapbs-r@mail.nih.gov
            Tissue Procurement: Louis M. Staudt, M.D., Ph.D.
            cDNA Library Preparation: Rubin Laboratory
            cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
            DNA Sequencing by: Institute for Systems Biology
            http://www.systemsbiology.org
            contact: amadan@systemsbiology.org
            Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
            Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
            
            Clone distribution: MGC clone distribution information can be found
            through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
            Series: IRAL Plate: 3 Row: a Column: 7
            This clone was selected for full length sequencing because it
            passed the following selection criteria: matched mRNA gi: 14141160.
FEATURES             Location/Qualifiers
     source          1..2634
                     /db_xref="H-InvDB:HIT000031649"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /clone="MGC:1992 IMAGE:2966453"
                     /tissue_type="Lymph, Burkitt lymphoma"
                     /clone_lib="NIH_MGC_8"
                     /lab_host="DH10B-R"
                     /note="Vector: pOTB7"
     gene            1..2634
                     /gene="HNRPU"
                     /gene_synonym="HNRNPU"
                     /gene_synonym="SAF-A"
                     /gene_synonym="U21.1"
                     /db_xref="GeneID:3192"
                     /db_xref="HGNC:HGNC:5048"
                     /db_xref="MIM:602869"
     CDS             152..2572
                     /gene="HNRPU"
                     /gene_synonym="HNRNPU"
                     /gene_synonym="SAF-A"
                     /gene_synonym="U21.1"
                     /codon_start=1
                     /product="heterogeneous nuclear ribonucleoprotein U
                     (scaffold attachment factor A)"
                     /protein_id="AAH03621.1"
                     /db_xref="GeneID:3192"
                     /db_xref="HGNC:HGNC:5048"
                     /db_xref="MIM:602869"
                     /translation="MSSSPVNVKKLKVSELKEELKKRRLSDKGLKAELMERLQAALDD
                     EEAGGRPAMEPGNGSLDLGGDSAGRSGAGLEQEAAAGGDEEEEEEEEEEEGISALDGD
                     QMELGEENGAAGAADSGPMEEEEAASEDENGDDQGFQEGEDELGDEEEGAGDENGHGE
                     QQPQPPATQQQQPQQQRGAAKEAAGKSSGPTSLFAVTVAPPGARQGQQQAGGDGKTEQ
                     KGGDKKRGVKRPREDHGRGYFEYIEENKYSRAKSPQPPVEEEDEHFDDTVVCLDTYNC
                     DLHFKISRDRLSASSLTMESFAFLWAGGRASYGVSKGKVCFEMKVTEKIPVRHLYTKD
                     IDIHEVRIGWSLTTSGMLLGEEEFSYGYSLKGIKTCNCETEDYGEKFDENDVITCFAN
                     FESDEVELSYAKNGQDLGVAFKISKEVLAGRPLFPHVLCHNCAVEFNFGQKEKPYFPI
                     PEEYTFIQNVPLEDRVRGPKGPEEKKDCEVVMMIGLPGAGKTTWVTKHAAENPGKYNI
                     LGTNTIMDKMMVAGFKKQMADTGKLNTLLQRAPQCLGKFIEIAARKKRNFILDQTNVS
                     AAAQRRKMCLFAGFQRKAVVVCPKDEDYKQRTQKKAEVEGKDLPEHAVLKMKGNFTLP
                     EVAECFDEITYVELQKEEAQKLLEQYKEESKKALPPEKKQNTGSKKSNKNKSGKNQFN
                     RGGGHRGRGGFNMRGGNFRGGAPGNRGGYNRRGNMPQRGGGGGGSGGIGYPYPRAPVF
                     PGRGSYSNRGNYNRGGMPNRGNYNQNFRGRGNNRGYKNQSQGYNQWQQGQFWGQKPWS
                     QHYHQGYY"
BASE COUNT          809 a          547 c          779 g          499 t
ORIGIN      
        1 caggcggatc cgctctgcag cacgaaccca tctccagccg cagccgcagc cgccgcccgg
       61 gccgaggagc agccgcagca gccgccacca gtggccgagt gagcggagcc gagtttgagg
      121 cagcgcctag cggtgaatcg gggccctcac catgagttcc tcgcctgtta atgtaaaaaa
      181 gctgaaggtg tcggagctga aagaggagct caagaagcga cgcctttctg acaagggtct
      241 caaggccgag ctcatggagc gactccaggc tgcgctggac gacgaggagg ccgggggccg
      301 ccccgccatg gagcccggga acggcagcct agacctgggc ggggattccg ctgggcgctc
      361 gggagcaggc ctcgagcagg aggccgcggc cggcggcgat gaagaggagg aagaagagga
      421 agaggaggag gaaggaatct ccgctctgga cggcgaccag atggagctag gagaggagaa
      481 cggggccgcg ggggcggccg actcgggccc gatggaggag gaggaggccg cctcggaaga
      541 cgagaacggc gacgatcagg gtttccagga aggggaagat gagctcgggg acgaagagga
      601 aggcgcgggc gacgagaacg ggcacgggga gcagcagcct caaccgccgg cgacgcagca
      661 gcaacagccc caacagcagc gcggggccgc caaggaggcc gcggggaaga gcagcggccc
      721 cacctcgctg ttcgcggtga cggtggcgcc gcccggggcg aggcagggcc agcagcaggc
      781 gggaggggac ggcaaaacag aacagaaagg cggagataaa aagaggggtg ttaaaagacc
      841 acgagaagat catggccgtg gatattttga gtacattgaa gagaacaagt atagcagagc
      901 caaatctcct cagccacctg ttgaagaaga agatgaacac ttcgatgaca cagtggtttg
      961 tcttgatact tataattgtg atctacattt taaaatatca agagatcgtc tcagtgcttc
     1021 ttcccttaca atggagagtt ttgcttttct ttgggctgga ggaagagcat cctatggtgt
     1081 gtcaaaaggc aaagtgtgtt ttgagatgaa ggttacagag aagatcccag taaggcattt
     1141 atatacaaaa gatattgaca tacatgaagt tcgtattggc tggtcactaa ctacaagtgg
     1201 aatgttactt ggtgaagaag aattttctta tgggtattct ctaaaaggaa taaaaacatg
     1261 caactgtgag actgaagatt atggagaaaa gtttgatgaa aatgatgtga ttacatgttt
     1321 tgctaacttt gaaagtgatg aagtagaact ctcgtatgct aagaatggac aagatcttgg
     1381 cgttgccttc aaaatcagta aggaagttct tgctggacgg ccactgttcc cgcatgttct
     1441 ctgccacaac tgtgcagttg aatttaattt tggtcagaag gaaaagccat attttccaat
     1501 acctgaagag tatactttca tccagaacgt ccccttagag gatcgagtta gaggaccaaa
     1561 ggggcctgaa gagaagaaag attgtgaagt tgtgatgatg attggcttgc caggagctgg
     1621 aaaaactacc tgggttacta aacatgcagc agaaaatcca gggaaatata acattcttgg
     1681 cacaaatact attatggata agatgatggt ggcaggtttt aagaagcaaa tggcagatac
     1741 tggaaaactg aacacactgt tgcagagagc cccccagtgt cttgggaaat ttattgagat
     1801 tgctgcccga aagaagcgaa attttattct ggatcagaca aatgtgtctg ctgctgccca
     1861 gaggagaaaa atgtgcctgt ttgcaggctt ccagcgaaaa gctgttgtag tttgcccaaa
     1921 agatgaagac tataagcaaa gaacacagaa gaaagcagaa gtagagggga aagacctacc
     1981 agaacatgcg gtcctcaaaa tgaaaggaaa ctttaccctc ccagaggtag ctgagtgctt
     2041 tgatgaaata acctatgttg aacttcagaa ggaagaagcc caaaaactct tggagcaata
     2101 taaggaagaa agcaaaaagg ctcttccacc agaaaagaaa cagaacactg gctcaaagaa
     2161 aagcaataaa aataagagtg gcaagaacca gtttaacaga ggtggtggcc atagaggacg
     2221 tggaggattc aatatgcgtg gtggaaattt cagaggagga gcccctggga atcgtggcgg
     2281 atataatagg aggggcaaca tgccacagag aggtggtggc ggtggaggaa gtggtggaat
     2341 cggctatcca taccctcgtg cccctgtttt tcctggccgt ggtagttact caaacagagg
     2401 gaactacaac agaggtggaa tgcccaacag agggaactac aaccagaact tcagaggacg
     2461 aggaaacaat cgtggctaca aaaatcaatc tcagggctac aaccagtggc agcagggtca
     2521 attctggggt cagaagccat ggagtcagca ttatcaccaa ggatattatt gaatacccaa
     2581 ataaaacgaa ctgatacata tttctccaaa accttcaaaa aaaaaaaaaa aaaa
//