LOCUS       BC003583                2833 bp    mRNA    linear   HUM 11-SEP-2007
DEFINITION  Homo sapiens fat mass and obesity associated, mRNA (cDNA clone
            IMAGE:3353414), complete cds.
ACCESSION   BC003583
VERSION     BC003583.1
KEYWORDS    .
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 2833)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   2  (bases 1 to 2833)
  CONSRTM   NIH MGC Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-FEB-2001) National Institutes of Health, Mammalian
            Gene Collection (MGC), Bethesda, MD 20892-2590, USA
  REMARK    NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT     Contact: MGC help desk
            Email: cgapbs-r@mail.nih.gov
            Tissue Procurement: ATCC
            cDNA Library Preparation: Rubin Laboratory
            cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
            DNA Sequencing by: Genome Sequence Centre,
            BC Cancer Agency, Vancouver, BC, Canada
            info@bcgsc.bc.ca
            Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
            Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
            Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
            Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
            Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
            Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
            Kim MacDonald,  Mike R. Mayo, Josh Moran, Diana Palmquist, JR
            Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
            Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
            
            Clone distribution: MGC clone distribution information can be found
            through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
            Series: IRAL Plate: 6 Row: n Column: 1
            This clone was selected for full length sequencing because it
            passed the following selection criteria: Hexamer frequency ORF
            analysis
            This clone has the following problem: The cds is short compared to
            the longest cds in the locus.
FEATURES             Location/Qualifiers
     source          1..2833
                     /db_xref="H-InvDB:HIT000050427"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /clone="IMAGE:3353414"
                     /tissue_type="Eye, retinoblastoma"
                     /clone_lib="NIH_MGC_16"
                     /lab_host="DH10B-R"
                     /note="Vector: pOTB7"
     gene            1..2833
                     /gene="FTO"
                     /db_xref="GeneID:79068"
                     /db_xref="HGNC:HGNC:24678"
                     /db_xref="MIM:610966"
     CDS             69..251
                     /gene="FTO"
                     /codon_start=1
                     /product="FTO protein"
                     /protein_id="AAH03583.1"
                     /db_xref="GeneID:79068"
                     /db_xref="HGNC:HGNC:24678"
                     /db_xref="MIM:610966"
                     /translation="MACQGREECWCQSRIARTLPADQKPECRPYWEKDDASMPLPFDL
                     TDIVSELRGQLLEAKP"
BASE COUNT          787 a          671 c          582 g          793 t
ORIGIN      
        1 gaacaaagga atgaaatctt gactgccatc cttgcctcgc tcactgcacg ccagaacctg
       61 aggagagaat ggcatgccag ggcagagagg agtgttggtg ccagtcacga attgcccgaa
      121 cattacctgc tgatcagaag ccagaatgtc ggccatactg ggaaaaggat gatgcttcga
      181 tgcctctgcc gtttgacctc acagacatcg tttcagaact cagaggtcag cttctggaag
      241 caaaacccta gaaggagcac aagtctcagg cggaggagaa aaagagatcg gcttttctcc
      301 tccaacgttg tcatgggctt aagcaagagc agtggagact tctcttggcc cctagattgt
      361 agcacccggg tcccaatcca aaacagctag gaaatggtgc ccatgaagtt ttaaatgttt
      421 taaaatgacc ctgtgttata gtctgatttg gtgttaaaca ggaccttctt cccccaaaat
      481 tgttcagatt ataaaatgtg agccattcag cccccaaggt ccagggcagg cgacaggaac
      541 gagcccagcg tgtgacaaag cctaacctac tttcctcttt cccaagcttt ttcagagact
      601 ctggagtgga cccagccctc tggggaaaga cagaacttag agacatccca gttactcacc
      661 acacccatag tgctgtccaa tatggtagcc actagctagc tgtggctact tcaatttaaa
      721 ttcagtttta attttaatta aaaatgcagc tcttcagtcg ccctggccac atttcaagtg
      781 cttaacagcc tcatgtggct agtgactgct gtattggacg gtacagatat ggaacatttt
      841 catcatcgaa gaaagtccta ttggacaaca cttctataaa aagtttgaga gcaggaattc
      901 tcatttccat tcgtctgtag cttctatccc caaaggcaaa gaaactaaaa gagaaatgac
      961 tcattgaaga ttggcctctt tcctttctct aagacaaacc taagtaaaag cctgagcttt
     1021 gagtcctatg ctcagcacac gggaaggaga tgttaataat taaaataaag ttgatatcct
     1081 gtctttaggg agttcccttg atctcttgaa agagacacag ccccatttac attatttcgt
     1141 ggatttcacc agcatagtat agtttttttc tgtaagtccc tcattcttat gtaataacag
     1201 gtggaactga ggtttgaaga acctcagtgg cccatcctga tgacattgga gactcaaaga
     1261 gacaagagag agtagggttt aaaacctgag ctttaagact cccactagct tcgtgtcctt
     1321 tggcatgtta acgtgcctca gtttcctcat ctgtataatg gggatatatg aaaggcacca
     1381 gtcctaaggt gaacattaag tgagatgatt ctagttacag acttagaaca atttccagca
     1441 catagttaaa tatccaggaa attctggtac tgttatgtgt gggtgagctg acctggatgt
     1501 agatgttttc ctctctcttg ctgacccctc cgccagtttt gtcttgtgat gccattaaca
     1561 catctctccc tttctgacct ggctcctgcc cattggtgtc ccaagaaatc gtgagaatag
     1621 ttagcccccc tctccccagc ctgttgcttt ctcgtgtagt tgttcacagt agttgagaag
     1681 ttgaagagct tttgcctatt gaaggtgcac tgagaataaa ctctttcctg ccaccagaat
     1741 tgcagtggtt cacggcctgc actcattccc atgaatgcag ttaatagcca cagaaatgtc
     1801 acattaagca aagcagccag ggtctcatcg tgttgagact cgagtctctc agaccttgga
     1861 ttcattccct ggtgtctttg agcctcagtt tcctcattgg taaaagagaa gtgaagcagt
     1921 gtctcacagg gtcattacag agattaaatg aaataaatga aataacatag accaggaggg
     1981 cgtggtgttt aaaagtcaca gatggggcac cctcgggcca tccagcccag tgttttcttt
     2041 agcccctatg atgttcattt tttgttatat cccattaggt gcccatattt aaaaattggg
     2101 agatttcaca taaaattaaa aggtctgcat tttctttttt cttttctttt tttttttttt
     2161 gagacacagt ctcactctgt caccaggcta gagtgcagtg gcacgatctc agctcactgc
     2221 aacctctgcc tcccaggttc aagtaattct cctgcctcag cctcccaagt agctgggact
     2281 acaggcacgt gccaccacgc ccagctaatt tttgtatttt tagcagagat ggggtttcac
     2341 cacattggcc aggatgatct cgatctcaac ctcgtgatcc acccacctcg gtctcccaaa
     2401 gcgctgggat tacaggcgtg agccaccgcg ccaagccaag gtctgcattt ttctttagaa
     2461 ctcagaacac ccaatagtcc taggccccca tcctcgcatg gcagcaagct aaataagcat
     2521 cttcccactg cgagttgggg catgacccag cctatggttt gccatactcc ctctttttct
     2581 ccgttttttc attaattgtg aacctgacct gcatcaccct ttcatgtcag tgctctccaa
     2641 acctgcttgc ttgcacccct ctagtcgaaa tattttgtgc ttaccccaat atatgtgtgt
     2701 gactattgaa ctctattcgt agactgcttg tactaatgtc atttgcatca taaaatattc
     2761 atatccaata aacatattaa aaagataaga taaaaaaaaa aaaaaaaaaa aaaaaaaaaa
     2821 aaaaaaaaaa aaa
//