LOCUS BC003573 1442 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens farnesyl-diphosphate farnesyltransferase 1, mRNA (cDNA clone MGC:2200 IMAGE:3538137), complete cds. ACCESSION BC003573 VERSION BC003573.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1442) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1442) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (20-FEB-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: DCTD/DTP cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 8 Row: p Column: 21 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 67089146. FEATURES Location/Qualifiers source 1..1442 /db_xref="H-InvDB:HIT000031611" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:2200 IMAGE:3538137" /tissue_type="Lung, small cell carcinoma" /clone_lib="NIH_MGC_7" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..1442 /gene="FDFT1" /gene_synonym="DGPT" /gene_synonym="ERG9" /gene_synonym="SQS" /gene_synonym="SS" /db_xref="GeneID:2222" /db_xref="HGNC:HGNC:3629" /db_xref="MIM:184420" CDS 70..1323 /gene="FDFT1" /gene_synonym="DGPT" /gene_synonym="ERG9" /gene_synonym="SQS" /gene_synonym="SS" /codon_start=1 /product="farnesyl-diphosphate farnesyltransferase 1" /protein_id="AAH03573.1" /db_xref="GeneID:2222" /db_xref="HGNC:HGNC:3629" /db_xref="MIM:184420" /translation="MEFVKCLGHPEEFYNLVRFRIGGKRKVMPKMDQDSLSSSLKTCY KYLNQTSRSFAAVIQALDGEMRNAVCIFYLVLRALDTLEDDMTISVEKKVPLLHNFHS FLYQPDWRFMESKEKDRQVLEDFPTISLEFRNLAEKYQTVIADICRRMGIGMAEFLDK HVTSEQEWDKYCHYVAGLVGIGLSRLFSASEFEDPLVGEDTERANSMGLFLQKTNIIR DYLEDQQGGREFWPQEVWSRYVKKLGDFAKPENIDLAVQCLNELITNALHHIPDVITY LSRLRNQSVFNFCAIPQVMAIATLAACYNNQQVFKGAVKIRKGQAVTLMMDATNMPAV KAIIYQYMEEIYHRIPDSDPSSSKTRQIISTIRTQNLPNCQLISRSHYSPIYLSFVML LAALSWQYLTTLSQVTEDYVQTGEH" BASE COUNT 409 a 346 c 355 g 332 t ORIGIN 1 gccggccggt gagcgcctgg ggaccgcaga ggtgagagtc gcgcccggga gtccgccgcc 61 tgcgccagga tggagttcgt gaaatgcctt ggccaccccg aagagttcta caacctggtg 121 cgcttccgga tcgggggcaa gcggaaggtg atgcccaaga tggaccagga ctcgctcagc 181 agcagcctga aaacttgcta caagtatctc aatcagacca gtcgcagttt cgcagctgtt 241 atccaggcgc tggatgggga aatgcgcaat gcagtgtgca tattttatct ggttctccga 301 gctctggaca cactggaaga tgacatgacc atcagtgtgg aaaagaaggt cccgctgtta 361 cacaactttc actctttcct ttaccaacca gactggcggt tcatggagag caaggagaag 421 gatcgccagg tgctggagga cttcccaacg atctcccttg agtttagaaa tctggctgag 481 aaataccaaa cagtgattgc cgacatttgc cggagaatgg gcattgggat ggcagagttt 541 ttggataagc atgtgacctc tgaacaggag tgggacaagt actgccacta tgttgctggg 601 ctggtcggaa ttggcctttc ccgtcttttc tcagcctcag agtttgaaga ccccttagtt 661 ggtgaagata cagaacgtgc caactctatg ggcctgtttc tgcagaaaac aaacatcatc 721 cgtgactatc tggaagacca gcaaggagga agagagttct ggcctcaaga ggtttggagc 781 aggtatgtta agaagttagg ggattttgct aagccggaga atattgactt ggccgtgcag 841 tgcctgaatg aacttataac caatgcactg caccacatcc cagatgtcat cacctacctt 901 tcgagactca gaaaccagag tgtgtttaac ttctgtgcta ttccacaggt gatggccatt 961 gccactttgg ctgcctgtta taataaccag caggtgttca aaggggcagt gaagattcgg 1021 aaagggcaag cagtgaccct catgatggat gccaccaata tgccagctgt caaagccatc 1081 atatatcagt atatggaaga gatttatcat agaatccccg actcagaccc atcttctagc 1141 aaaacaaggc agatcatctc caccatccgg acgcagaatc ttcccaactg tcagctgatt 1201 tcccgaagcc actactcccc catctacctg tcgtttgtca tgcttttggc tgccctgagc 1261 tggcagtacc tgaccactct ctcccaggta acagaagact atgttcagac tggagaacac 1321 tgatcccaaa tttgtccata gctgaagtcc accataaagt ggatttactt tttttcttta 1381 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaacctcg 1441 gg //