LOCUS BC003570 2145 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens vesicle-associated membrane protein 3 (cellubrevin),
mRNA (cDNA clone MGC:2110 IMAGE:3544610), complete cds.
ACCESSION BC003570
VERSION BC003570.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2145)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2145)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (20-FEB-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 8 Row: d Column: 8
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 42544205.
FEATURES Location/Qualifiers
source 1..2145
/db_xref="H-InvDB:HIT000031608"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:2110 IMAGE:3544610"
/tissue_type="Kidney, renal cell adenocarcinoma"
/clone_lib="NIH_MGC_14"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2145
/gene="VAMP3"
/gene_synonym="CEB"
/db_xref="GeneID:9341"
/db_xref="HGNC:HGNC:12644"
/db_xref="MIM:603657"
CDS 36..338
/gene="VAMP3"
/gene_synonym="CEB"
/codon_start=1
/product="vesicle-associated membrane protein 3
(cellubrevin)"
/protein_id="AAH03570.1"
/db_xref="GeneID:9341"
/db_xref="HGNC:HGNC:12644"
/db_xref="MIM:603657"
/translation="MSTGPTAATGSNRRLQQTQNQVDEVVDIMRVNVDKVLERDQKLS
ELDDRADALQAGASQFETSAAKLKRKYWWKNCKMWAIGITVLVIFIIIIIVWVVSS"
BASE COUNT 622 a 450 c 437 g 636 t
ORIGIN
1 ctctcgtcgc cgctgccgcc gccgcagctg ccaaaatgtc tacaggtcca actgctgcca
61 ctggcagtaa tcgaagactt cagcagacac aaaatcaagt agatgaggtg gtggacataa
121 tgcgagttaa cgtggacaag gttctggaaa gagaccagaa gctctctgag ttagacgacc
181 gtgcagacgc actgcaggca ggcgcttctc aatttgaaac gagcgcagcc aagttgaaga
241 ggaaatattg gtggaagaat tgcaagatgt gggcaatcgg gattactgtt ctggttatct
301 tcatcatcat catcatcgtg tgggttgtct cttcatgaag aaccagcgga actcaaaact
361 gctgttcaag aaacctcttc aagacttttg acttagaacc tgctatatta tcaagcttac
421 ctactgttat ctctaaaatt ttttttgtgt taatgtaaag ttgaatttct aggaaacgtg
481 cctttgtttt ttaatatgca ctccaaatta gaaggccggc cccgtccaca ttttgcacag
541 tgcctttaca gatttacgta tgggctgatg aagaggcctt cttaagttcc agagtgctat
601 aatctagatg taatgttgtc actaattaat tgccattact cccagttagt tacccttgtc
661 atttggcatt attttcagaa ccacatttta aacctttggg taatcagatt tccaacttat
721 gccttccaga aaaaaacact actgcctaac acaaatctgt gataacaaca ggctgtgcct
781 tattttgata attttctgat tccctagaag agaaccctct actttttgta agcactactg
841 actctcgctg tatttaagat gctggtgaag agcttttgct cttgcattag atttgaagat
901 gtttacattg ttgttattgt tatgtatcac ttgctaaaaa tattgtttta atcagagata
961 acctctttaa aaaaattttt aaagaactat ggctatgacc aaagcttcta ttttgccaaa
1021 aagttaaata ccgataaaat ggccttaagt gtattcctga cagttaaatt cagaaacgtg
1081 ccaaatggaa ctcaaggtgc cccttcagaa ttaaaatcat taccttgtgt gtgaaccttc
1141 tacatcttca taggcctttc ttccttttga aaggctgtag acagtgtggc tccccttctg
1201 attcagtatt ttgcatgggg gttagagaag gtttgaggta gactctgacc gtctcataaa
1261 agagttctac ccagcagttg gcagattatc agctgtggac tccagcatgt ttctgataat
1321 tatgcaagca acaattctgt agcctcaagt aagaccacct gtgaacttga tcattatctg
1381 gcccaaatat gaagataaac tataactttg gagtttgttt cctatttgta ttcacattct
1441 gcttcctaaa tcagttttct aaattatgcc tgcaattagg cattggtcag gggtgaatgg
1501 ctcttttcac agagagtagc caaccagaga cctttgcttt gatatcatca actgcagaga
1561 atgctgttga tgggaatgct ggaagcagaa actttgtcat cggaaaaact tttcttgtat
1621 gcatgagact caacatcagg atccacagct taaagatggg aattcaggta tgaaagaaaa
1681 caggcaagga ggcactgagg gagaaagaca cagactttat cgctctgtgg ctcattgtta
1741 ctggaatatt ctaaaactct tgttcacatg ctattatgac ttataaagca gcaacagctg
1801 aggcgcacca ggacacagct tccatttctt taacgtctgt tcccttaaca tcgctgaaat
1861 gatttactgt tgaagagatg ccttgcggtg tggccagctg tgaggagaaa gcagctggca
1921 gtgttaggac attagtccac cttcagcgca gggtctctgg ccgggtctga ctcagaaacc
1981 ttggtactcg ccccttggcc acagtgccca gacccatgta acccactggc tcctgcatta
2041 acccagaaat acctcgcttc tatctgtgca cttagctggg aacttaccca ctgtaatcac
2101 ctaaataaag tgtttataaa catgaaaaaa aaaaaaaaaa aaaaa
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